Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3276 |
Symbol | |
ID | 4644493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3484547 |
End bp | 3485290 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639806751 |
Product | pseudouridine synthase |
Protein accession | YP_954080 |
Protein GI | 120404251 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0129049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA ACGACGGAAT CCGACTTCAG AAAGTGTTGT CGCAGGCGGG AATTGCGTCT CGGCGAGTCG CGGAGAAGAT GATCCGGGAC GGCCGGGTCG AGGTGGACGG CCGGATCGTC ACCGAGTTGG GCACCCGGGT GGATCCGGCG GCCTCGGTGA TCCGGGTGGA CGGTGCCCGG ATCACGGTCG ACGACACCCT CGTGTACCTG GCCATCAACA AACCGCGCGG GATGCACTCG ACGATGTCCG ACGACCGCGG CCGGCCGTGT GTCGGCGACC TTGTGGAGCA CCGGGTTCGC GGCAACAAGA AGCTGTTTCA CGTCGGGCGC CTGGACGCAG ACACCGAGGG GCTGCTGTTG CTGACCAACG ACGGGGAATT GGCGCACCGG TTGATGCACC CGTCATTCGA GGTGCCCAAG TCCTACGTCG CGACCGTGCT CGGTTCGGTG CCCAAGGGGT TGGGCCGCAA GCTGCGTGAG GGAGTCGAGC TGGAGGACGG ACCCGTCCAG GTCGACGATT TTGCCGTCGT CGACACGACG CCGGGCCGGA CGCTGGTGCG GGTGACCCTG CACGAGGGCC GCAAACACAT CGTGCGGCGG CTGCTGGCCG AAGTCGGGTT CCCGGTGCAG GAATTGGTGC GCACCGACAT CGGCACGGTG TCGTTGGGCG ATCAGCGCCC CGGCAGCATC CGGGTGTTGA CACAGAAGGA AATCGGCGAA CTGTACAAGG CGGTGGGCCT GTGA
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Protein sequence | MTDNDGIRLQ KVLSQAGIAS RRVAEKMIRD GRVEVDGRIV TELGTRVDPA ASVIRVDGAR ITVDDTLVYL AINKPRGMHS TMSDDRGRPC VGDLVEHRVR GNKKLFHVGR LDADTEGLLL LTNDGELAHR LMHPSFEVPK SYVATVLGSV PKGLGRKLRE GVELEDGPVQ VDDFAVVDTT PGRTLVRVTL HEGRKHIVRR LLAEVGFPVQ ELVRTDIGTV SLGDQRPGSI RVLTQKEIGE LYKAVGL
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