| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3200 |
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| Symbol | |
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| ID | 4648478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3403998 |
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| End bp | 3406355 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639806677 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_954008 |
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| Protein GI | 120404179 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0648133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.853857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGGCC ACTCGAAATC GAGTAGGGTT CCGCGCGTGA TCAAGTCTGT AAACGTCCGT
CTCGCTGAGG AACTGGAGGT GGCAGAGACG CAGGTGGCTG CGGCTGTGCG CCTGCTCGAC
GAAGGTGCCA CGGTGCCTTT CATCGCCCGC TACCGCAAGG AGGCCACCGG CAGCCTTGAC
GACGGCCAAC TTCGGGTTCT GGAGGAACGG CTGGCGTACC TTCGCGAGCT CGACGAGCGC
CGCAGTGCGG TGCTTGCCTC GATCAAGGAA CAGGGCAAGC TCACCGACGA TCTGACCGCC
GCGCTGATGG CCGCCGACAC CAAGGCCCGC GTCGAGGACA TCTACCTGCC CTTCAAACCC
AAGCGGCGGA CCAAGGCGCA GATCGCCAGG GAAGCCGGGC TGGAGCCGCT GGCAGACCGA
TTGCTGGCCG ATCCGACACT GGTGCCCGAG CAGACGGCAG CGGAGTTCGT CGGCGAGGAG
GTGGCCGACG TCACGGCGGC ACTCGAGGGC GCACGGCACA TCATCGTCGA ACGCGCCGCC
GAGGACGCCG AGCTCGTCGG CGGGTTGCGG GAACGGTTCT GGGAGTCAGG AACGCTGCGC
ACCCGGCCGG CCTCCGAGGC CGCCGCGAGC GCGGAGAAGT CGCAGAAGTT CCGCGACTAC
TTCGACTACG CGGAACCGCT GACGGAGATG CCGTCGCACC GGGTGCTCGC GGTGCTGCGC
GGCGAGAAGG AACAGGCGCT GGCGCTGACC CTGGACGGGG GTGAGGAGGA CTCCTACCTG
GCGATGATCG CCTCCGCGCT GGGGATCGAC CTGACCGCGG CCGCACCGGC CACCCGATGG
CTGGCGTCCA CCGTCGGCTT CGCGTGGCGC ACCCGGCTCT CGGTGTCGGC GTCGGTGGAT
GCGCGGGTGC GGCTGCGCCT GCGCGCCGAG CAGGACGCCG TGACCGTGTT CGCCAAGAAC
CTCAAGGACC TGCTGCTGGC GGCACCGGCG GGCAACCGGA CCACGATGGG CCTGGATCCC
GGCTTCCGGA CCGGCGTCAA GGTTGCCGTC GTCGACGGCA CCGGCAAGGT GCTCGACACC
TGCGCGATCT ACCCGCACCA GCCGCAGAAG CAGTGGGATG CGGCCAAGGC GACGCTGGCT
GCGCTCGTCG CGCGGCACGG CGTCGAGCTG ATCGCGATCG GCAACGGCAC CGCGTCGCGT
GAAACAGACG CGCTGGCAAC CGAACTCATC GCGGACATCC GCACGGCCGG GGCGAACGCG
CCGGCCAAGG CGATCGTCAG CGAGGCCGGC GCTTCGGTGT ACTCGGCGTC CGCCTACGCC
GCCCACGAAC TGCCCGACCT CGACGTCACG CTGCGCGGCG CGGTGTCCAT CGCCCGCCGC
CTGCAGGACC CGCTCGCCGA GCTCGTCAAG ATCGAGCCGA AGTCCATCGG TGTGGGGCAG
TACCAGCACG ACGTCACCCC GGGCACCCTG GCCAGGAGCC TGGGAGCGGT GGTCGAGGAT
GCGGTGAACG CGGTCGGCGT GGACCTCAAC ACGGCGTCGG TCCCGCTGCT GGCGCGGGTC
TCCGGGATCA CCGAGTCGCT GGCCGAGGCG ATCGTCGCCC ACCGCGACAA GACCGGCCGC
TTCCAGAACC GTCGCGCGCT GCTCGACGTT CCGCGGTTGG GCCCCAAGGC TTTCGAACAG
TGCGCCGGGT TCCTGCGGAT CCGTGACGGC GAAGATCCGC TCGACGCCTC CGGCGTGCAT
CCCGAGTCCT ACCCGGTGGT GCGGCGCATC CTCGACCGCG CCAACGTCAC GCTGGCCGAG
ATCATCGGTA ACGAGCGCAC GCTGCGCGCG CTGCGTCCCG CAGACTTCGC CGACGACCGG
TTCGGTATCC CGACCGTCAC CGACATCCTC GGTGAGCTCG AAAAGCCCGG CCGGGACCCG
CGCCCGGCCT TCACCACCGC GACGTTCGCC GCGGGCGTGG AAAAGGTGGC CGACCTCAAG
GTCGGGATGA TCCTCGAGGG TGTGGTGACC AATGTGGCGG CCTTCGGCGC GTTCGTCGAC
GTGGGGGTGC ACCAGGACGG TCTGGTGCAC GTCTCGGCGA TGGCCGACCG CTACATCTCC
GATCCCCACG AGGTGGTGCG GTCCGGGCAG GTGGTGCGGG TGAAGGTGGT CGACGTCGAC
GTCGACCGGC AGCGCATCGG GTTGAGCCTG CGCCTCAAGG ACGACGTGAA GCCCGAGCGC
GGCGGCGGCC GGCGAGGTGA CCGGCCCGCC AATCCTAAAC GAAATCCGCA GCGCGCCAAC
AACTCCGGTC GCCGGGAAGC CGGCAGCGGT GGCGGGTCGA TGGCCCAGGC GCTGCGGGAA
GCGGGTTTCG GTCGATGA
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| Protein sequence | MGGHSKSSRV PRVIKSVNVR LAEELEVAET QVAAAVRLLD EGATVPFIAR YRKEATGSLD
DGQLRVLEER LAYLRELDER RSAVLASIKE QGKLTDDLTA ALMAADTKAR VEDIYLPFKP
KRRTKAQIAR EAGLEPLADR LLADPTLVPE QTAAEFVGEE VADVTAALEG ARHIIVERAA
EDAELVGGLR ERFWESGTLR TRPASEAAAS AEKSQKFRDY FDYAEPLTEM PSHRVLAVLR
GEKEQALALT LDGGEEDSYL AMIASALGID LTAAAPATRW LASTVGFAWR TRLSVSASVD
ARVRLRLRAE QDAVTVFAKN LKDLLLAAPA GNRTTMGLDP GFRTGVKVAV VDGTGKVLDT
CAIYPHQPQK QWDAAKATLA ALVARHGVEL IAIGNGTASR ETDALATELI ADIRTAGANA
PAKAIVSEAG ASVYSASAYA AHELPDLDVT LRGAVSIARR LQDPLAELVK IEPKSIGVGQ
YQHDVTPGTL ARSLGAVVED AVNAVGVDLN TASVPLLARV SGITESLAEA IVAHRDKTGR
FQNRRALLDV PRLGPKAFEQ CAGFLRIRDG EDPLDASGVH PESYPVVRRI LDRANVTLAE
IIGNERTLRA LRPADFADDR FGIPTVTDIL GELEKPGRDP RPAFTTATFA AGVEKVADLK
VGMILEGVVT NVAAFGAFVD VGVHQDGLVH VSAMADRYIS DPHEVVRSGQ VVRVKVVDVD
VDRQRIGLSL RLKDDVKPER GGGRRGDRPA NPKRNPQRAN NSGRREAGSG GGSMAQALRE
AGFGR
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