Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3164 |
Symbol | |
ID | 4646396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3365774 |
End bp | 3367687 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639806641 |
Product | ABC transporter |
Protein accession | YP_953972 |
Protein GI | 120404143 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0211349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.192847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACGT TCACCCCGAC ACTTGATTGG GGCAACGAGC TGTGGACCTC GCTGTGGTGG ATCGCCCAGG GCTGGGCATA TGCCGCGGTG GCCACCATCG TCGTGCTGGC GCTGATCGTG CGGTTCACCA CCTGGGGTCG CCAGTTCTGG CGCGTCACCC GTGGCTATTT CACCGGCCCC GAGAGCCTGA TCGTCTGGCT GTGGCTGGCC GTCATCCTGC TGCTGGTGAT CCTGAGCGTG CGGCTGTCGG TGCTGTTCAG CTTCCAGGGC AACGACATGA TGACCAGCTT CCAGGTCATC GCGTCCGGCG TCGGTGCGGG CGATGACGCC GTCAAACAGT CGGGCGGGGA CGGCTTTTGG ATGTCGATGG GCGTTTTCGC GGTGCTGGCC GTCATCAACG TGGTCAGCAT CATGGTCGAT CTGCTGCTCA CGCAGCGCTT CATGCTGCGG TGGCGGACCT GGCTCACCGA TCGGCTGACC GGCGACTGGC TCGACGGCAA GGCCTACTAC CGGTCCCGGT TCATCGACGA CACCATCGAC AACCCCGACC AGCGCATCCA GGCCGACATC GACATCTTCA CCGCGGGTGT CGGCCCGCTG CCGAACATGC CGAACAACAC CTCAGGGTCG ACGCTGCTGT TCGGGGCGGT GTCCTCGATC GCGGCGATGA TCTCGTTCAC CACGATCCTG TGGAACCTGT CGGGTCCGGT GACACTGCCG TTCGTGGGGT TCGAATTGCC CAAGGCGATG TTCGTCATCG GCATCGTCTA CATCCTGTTC GCGACGGTCG TCGCGTTCGT GATCGGACGT CCGATCATCA CGCTGTCGTT CAACAACGAG AAGTTCAACG CCGCGTTCCG TTACGCGCTG GTCCGACTGC GTGATGCGGC CGAAGCCGTG GCGTTCTACC GCGGCGAGAT CGCCGAGAGG ACCGGGCTGC GGCGCCGGTT CGGGCCGATC GTCGAGAACT ACAAGAAGTA CGTGAACCGG ATGGCCGGCT TCCTCGGCTG GAACCTGTCG ATCAGCCAGG CACAGGAGCT CATCCCCTAC ATCGTGCAGT TCCCACGGTT CTTCAGCGGC GAGATCACGC TGGGACAGCT CTCGCAGACC GCGGGCGCGT TCCGCGAGAT CCTCACCGGG CTGTCGTTCT TCCGCAACGC CTACGACCAG TTCGCCGGAT ACCGCGCCGC CATCATCCGT CTGCACGGAC TGGTGGTCGC CAACGAGGAG GGTCGCGAAC TGCCCACTCT GACAGTCGAA CCCAGTTCCG GGAACACGGT CGAACTCGAC GACGTCGAAG TGCGCAAGCC CGACGGCACC CAGCTGATCG ACCCGATCGA TCTTCGCCTC GAGGCGGGTG ACACGCTGGC GGTCACCGGC GTCTCGGGTA CGGGCAAGAC GACGCTGCTG CGCAGTCTCG CGCAGCTGTG GCCGTACACG ACGGGTACGC TGCGATGCCC GCAGGGAACC AACGAGACGA TGTTCCTCTC GCAGCTGCCC TACGTCCCGC TCGGCGATCT GCGCGCGGTG CTGTCCTACC CCCGTCAGGT TGGGGACATC CCGGACAGCG AGCTGGTCGC GGTCCTGAAC AAGGTCGCTC TTCCGCATCT GGTGAGCCGT CTCGACGAAG AGCAGGACTG GGCCAAGGTG CTGTCCCCGG GTGAGCAGCA GCGAGTGGCG TTCGCCCGCA TCCTGCTGAC CAGGCCCAAG GCGGCGTTTT TCGACGAAGC CACCTCCGCC CTCGACGTGG GCCTGGAGAC GATGCTCTAT CAGATGGTGC GCGACGAGCT CCCGGACACG ATCCTGGTCA GCGTCGCGCA CCGCGGCACC GTGATCAGAC AGTGCGAAAA GGAGCTGGCT CTTCTCGGCG ACGGCCGGTG GCGGCTCGGG CTCGCCGGAG CCGACGCCCC CTAG
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Protein sequence | METFTPTLDW GNELWTSLWW IAQGWAYAAV ATIVVLALIV RFTTWGRQFW RVTRGYFTGP ESLIVWLWLA VILLLVILSV RLSVLFSFQG NDMMTSFQVI ASGVGAGDDA VKQSGGDGFW MSMGVFAVLA VINVVSIMVD LLLTQRFMLR WRTWLTDRLT GDWLDGKAYY RSRFIDDTID NPDQRIQADI DIFTAGVGPL PNMPNNTSGS TLLFGAVSSI AAMISFTTIL WNLSGPVTLP FVGFELPKAM FVIGIVYILF ATVVAFVIGR PIITLSFNNE KFNAAFRYAL VRLRDAAEAV AFYRGEIAER TGLRRRFGPI VENYKKYVNR MAGFLGWNLS ISQAQELIPY IVQFPRFFSG EITLGQLSQT AGAFREILTG LSFFRNAYDQ FAGYRAAIIR LHGLVVANEE GRELPTLTVE PSSGNTVELD DVEVRKPDGT QLIDPIDLRL EAGDTLAVTG VSGTGKTTLL RSLAQLWPYT TGTLRCPQGT NETMFLSQLP YVPLGDLRAV LSYPRQVGDI PDSELVAVLN KVALPHLVSR LDEEQDWAKV LSPGEQQRVA FARILLTRPK AAFFDEATSA LDVGLETMLY QMVRDELPDT ILVSVAHRGT VIRQCEKELA LLGDGRWRLG LAGADAP
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