Gene Mvan_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3093 
Symbol 
ID4646849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3260154 
End bp3261176 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID639806570 
Productextracellular solute-binding protein 
Protein accessionYP_953901 
Protein GI120404072 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.383646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.418833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACT CGCGATTTGC CGGCGTACTC GCAGTGATCA CGGCGATGCT GGCACTCACC 
GCATGCGGGT CAGGGTCACA GTCCGAGGAC GCCGACAAGA TCGTCGTCTA CGCCGGCCGC
AGTGAAGCGC TCATCGCGCC GTTGATCGAG CAGTTCACCG CCGACACCGG CATCGAGGTC
GAAGCGCGCT ACGCCGGTTC CGGCGAGCTG GCCGCCCAGC TGATCACCGA GGGTGACAAA
TCCCCCGCGG ACGTGTTCCT GTCCCAGGAC GCCGGCGCGC TCGGCGCCGT CTCCAAGGCC
GGACTCTTCG CCCCCATCAG TCCCGACACG CTGGCCGCGG TGCCCGCGCA GTACTCCGCC
GCGGACGGCA CCTGGGTGGG CGTGTCAGGG CGCGCGCGGG TCATCGTCTA CAACCCGACC
CTGGCGCCGA ACCCGCCGGA CACCATCGAC GGCCTGCTGG CGCCGGAGTG GAAGGGCAAG
ATCGGATTCG CGCCGAGCAA CGCGTCCTGG CAGGCCTTCG TGACCGGCCT TCGCGTGCTG
CGTGGCGACG ACGGCGCCGA GCGGTGGTTG CGGGCGTTCA AGGACCAGGA TCCCCAGGCG
TTCGAGAACA ACGTCGCGGT CCGCGACGCC GTCAACTCGG GACAGATCCC GCTGGGCCTG
GTGAACCACT ACTACCTCTA CGAGCTGATC AACTCCAAGG GTCCCGACGC GGTGGTCGCC
GAGAACAAGT TCATGGCCCC GGGAGATCCC GGCGGTCTGA TCAACGTCGC CGGGGTGGGC
GTCCTGAAGG CCGCGCCCAA CCCGGAGGGC GCGCAGGAGT TCGCGAAGTA CCTGGTCGGG
GAGTCGGCAC AGAAGTACTT CGCCCAGGAG ACCGCCGAGT ACCCACTCCT CGCGTCGGTG
CCGCCGTCGG CGGAGATGCC TGCCCTGGCC GACCTTGCGC CACCGGCGGT CGACCTCTCG
CAGCTCGACG ACATCGAGGC CACCCAGGAG CTGCTGGTCA AGACCGGCCT GCTGACGAAC
TGA
 
Protein sequence
MSNSRFAGVL AVITAMLALT ACGSGSQSED ADKIVVYAGR SEALIAPLIE QFTADTGIEV 
EARYAGSGEL AAQLITEGDK SPADVFLSQD AGALGAVSKA GLFAPISPDT LAAVPAQYSA
ADGTWVGVSG RARVIVYNPT LAPNPPDTID GLLAPEWKGK IGFAPSNASW QAFVTGLRVL
RGDDGAERWL RAFKDQDPQA FENNVAVRDA VNSGQIPLGL VNHYYLYELI NSKGPDAVVA
ENKFMAPGDP GGLINVAGVG VLKAAPNPEG AQEFAKYLVG ESAQKYFAQE TAEYPLLASV
PPSAEMPALA DLAPPAVDLS QLDDIEATQE LLVKTGLLTN