Gene Mvan_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2428 
Symbol 
ID4647672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2580686 
End bp2581480 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID639805911 
ProductABC transporter-related protein 
Protein accessionYP_953247 
Protein GI120403418 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.419191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0707207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACC TTCCCGGGGT AAGGTCATCA CGCATGGAGA GCCCCAGGGA GTCCCCTGAT 
GTGCCGATGA TCTCGATGAA GGCGGTCAAC AAGCATTTCG GCTCCCTCCA CGTCCTCAAG
GACATCAACC TCGACGTCGG TCAGGGACAG GTCGTCGTCG TGCTGGGGCC GTCGGGTTCG
GGCAAGTCGA CGTTGTGTCG CACCATCAAC CGTCTGGAGA CCATCGATTC GGGCACCATC
GCGATCGACG GCAAGGTGCT GCCCGCGGAG GGGCGCGGCC TGGCCCAGCT ACGTTCCGAT
GTCGGCATGG TGTTCCAGTC CTTCAACCTG TTCGCGCACA AGACAATTCT GGAGAACGTG
ACACTCGCAC CGATGAAGGT GCGCAAGACA TCCAAGGATC AGGCGCGGGA GAAGGCGATG
AGCCTGCTCG AGCGGGTCGG TGTGGCCAAC CAGGCCGACA AGTATCCCGC GCAGCTCTCC
GGGGGCCAGC AGCAGCGCGT CGCGATCGCC CGCTCACTGG CCATGAATCC CAAGGTGATG
CTGTTCGACG AACCGACCAG CGCACTGGAT CCCGAGATGA TCAACGAAGT GCTGGCGGTG
ATGGCCGGAT TGGCGACGGA CGGCATGACG ATGCTCGTGG TCACCCACGA GATGGGCTTC
GCGCGCAGGG CCGCCAACCG CGTGGTGTTC ATGTCCGACG GCGCCATCGT CGAGGACGCC
GAACCCGCCC GGTTCTTCGA GCACCCCCAG ACCGACCGCG CCAAGGACTT TCTCGGCAAG
ATCCTCCACC ACTGA
 
Protein sequence
MLDLPGVRSS RMESPRESPD VPMISMKAVN KHFGSLHVLK DINLDVGQGQ VVVVLGPSGS 
GKSTLCRTIN RLETIDSGTI AIDGKVLPAE GRGLAQLRSD VGMVFQSFNL FAHKTILENV
TLAPMKVRKT SKDQAREKAM SLLERVGVAN QADKYPAQLS GGQQQRVAIA RSLAMNPKVM
LFDEPTSALD PEMINEVLAV MAGLATDGMT MLVVTHEMGF ARRAANRVVF MSDGAIVEDA
EPARFFEHPQ TDRAKDFLGK ILHH