Gene Mvan_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_2397 
Symbol 
ID4644819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2553685 
End bp2554017 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content71% 
IMG OID639805881 
ProductXRE family transcriptional regulator 
Protein accessionYP_953217 
Protein GI120403388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00284023 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACAC TGCTGCGGGA GGTCATCGGC GACGTGCTGC GTCGCGCCCG GGTCGAGCAG 
GGGCGGACCC TGCGGGAGGT CTCGGATTCG GCGCGGGTGA GCCTGGGCTA CCTGTCGGAG
GTCGAGCGCG GCCGCAAAGA AGCCTCCAGC GAGCTGCTCA GCGCCATCTG CGGGGCGCTG
GACGTCCCGC TGTCGCGGGT GCTCTCCGAG GCCGGTGACG AAATGGCCGT CGAGGAAGCG
CGGGTGGCGG CGCCCGAGCC CATCGGCACC GCCGGTATCG ACGTCACCAC CAAGGTCGTC
ATTCCGCAGG TCGTGTCGAT GGCGGTGGCC TGA
 
Protein sequence
MTTLLREVIG DVLRRARVEQ GRTLREVSDS ARVSLGYLSE VERGRKEASS ELLSAICGAL 
DVPLSRVLSE AGDEMAVEEA RVAAPEPIGT AGIDVTTKVV IPQVVSMAVA