Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_2307 |
Symbol | |
ID | 4644342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 2464088 |
End bp | 2465614 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639805791 |
Product | major facilitator superfamily transporter |
Protein accession | YP_953127 |
Protein GI | 120403298 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.018174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0567456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCG GGTCGTCAGA ACACGCGACG ACTCCGTTGT CGAAATCGGT GCTGGGCATC GCGATCGTCG CGATCACCGG CATGCAGCTG ATGTCCACGC TCGACGGCAC CATCGTGATC GTCGCGCTGC CGCGGATGCA GGCCGAACTG AACCTCTCCG ACGCGGGCAA GAGCTGGGTC ATCACCGCCT ATGTGCTGGC TTTCGGCGGC CTGCTGCTGC TCGGCGGGCG CATCGGTGAC GCGGTCGGGC ACAAACGCGC CTTCCTGTCC GGCGTCGGTC TCTTCACGAT CGCCTCCCTC GTGTGCGGCC TGGCCACCGA GGAGATCACG CTCGTCGCCG CGCGCGCGTT CCAGGGCGCA GGCGCCGCGG TGGCCGCCCC GACCGGGCTG GCGCTGATCG CCACCACCTA CGCCGTCGGC CACGCCCGCA ACCGCGCGCT GGCGGTGTCG GCGGCGATGC TGGCCACCGG GTCGGTCCTC GGCCTGGTGC TCGGCGGCGC GCTGACCGTC GTGTCGTGGC GGCTGGCCTT CCTGATCAAC GTCCCGATCG GCATCGCGAT CATCGCGATC GCGGTGTTCC GGCTCGCCGA GACGCACCAC GAGCGACTCA AGCTCGACGT CACCGGCGCC CTGCTGGCCA CGCTGGCCTG CACGTCGGCC GTCCTGTTCT TCACGCAGGG CCCGTCCCGA GGCTGGGCCG ACCCGTTCGT CATCGGCGCG GCCGTCGCGT CGGCGCTGCT GTTCGTCGCG TTCTTCGTCG TCGAGCGCTC CGCCGACCAC CCGATCGTCC CGCTGACGGT GTTCGACAAC CGCAACCGGG TGGCGACGTT CCTCTCGCTG TTCCTGGCCG GCGGGGTGAT GCTGAGCGCG ACGGTGATGA TCGGCCTGTA CGTCCAGGAC GTCATGGGCT ATTCGGCGCT GCAGGCCGGC ATGGCCTTCA TCCCGTTCGC GCTCGCGCTG GGCGTCGGCA CCGTCGTCGC GGCCCGGGTG GCGCCCTATC TCGCGCCGCG GTGGATCATC CTCGGCGCCG GCCTTCTGGT GCCGTGCGCG ATGCTCTACG GCTCGACACT CGACCGCGGC ATCCCGTACG TCCCGGACCT GATCGCGCCC CTGGTGGTCG GCGGCTTCGG CATCGGGGTG ATCTCGGTGA TCCTGCCGCT GTGCGCGATC GCCGACGTCG GAGCGCGCGA GATCGGACCC GTCTCGTCGA TCACACTGAT GGTGCAGAAT CTCGGCGGAC CCGTGGTGCT GGTCGTCATC CAGGCGGTGC AGACCTCACG CACCCTCTAC CTGGGCGGAA CCACCGGACC GGTGGCCGCC ATGACGCCCG CTCAACTCGA TGCGCTCGAC GCCGGCTACA CCTATTCGCT GCTGTGGGTG GCCGCGGTTT CGGTGCTCGT CGGCGCGGCG GCGCTGTTCA TCGGGTTTTC GGCGCGCCAG ATCGCGGTGG CGAAGTACAA CCGCGACGCG GTGGAGACAG GCGAGCTCTG GATTTCGGCG GAGCAGCGCG GAGCGACGGA GGGCTGA
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Protein sequence | MASGSSEHAT TPLSKSVLGI AIVAITGMQL MSTLDGTIVI VALPRMQAEL NLSDAGKSWV ITAYVLAFGG LLLLGGRIGD AVGHKRAFLS GVGLFTIASL VCGLATEEIT LVAARAFQGA GAAVAAPTGL ALIATTYAVG HARNRALAVS AAMLATGSVL GLVLGGALTV VSWRLAFLIN VPIGIAIIAI AVFRLAETHH ERLKLDVTGA LLATLACTSA VLFFTQGPSR GWADPFVIGA AVASALLFVA FFVVERSADH PIVPLTVFDN RNRVATFLSL FLAGGVMLSA TVMIGLYVQD VMGYSALQAG MAFIPFALAL GVGTVVAARV APYLAPRWII LGAGLLVPCA MLYGSTLDRG IPYVPDLIAP LVVGGFGIGV ISVILPLCAI ADVGAREIGP VSSITLMVQN LGGPVVLVVI QAVQTSRTLY LGGTTGPVAA MTPAQLDALD AGYTYSLLWV AAVSVLVGAA ALFIGFSARQ IAVAKYNRDA VETGELWISA EQRGATEG
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