| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2187 |
|---|
| Symbol | rpsP |
|---|
| ID | 4645562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 2336873 |
|---|
| End bp | 2337349 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639805672 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_953008 |
|---|
| Protein GI | 120403179 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0623355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.816199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCA AGATCAAGCT CGCCCGCTTC GGCAAGATCC GCAATCCCCA GTACCGCATC
GCCGTCGCCG ATGCGCGCAA CCGCCGCGAC GGTCGCGCCA TCGAGGTCAT CGGCCGGTAC
CACCCGAAGG AAGAGCCGAG CGTCATCGAG ATCGACTCGG AGCGCGCACA GTACTGGCTG
GGCGTCGGCG CCCAGCCGAC CGAGCCCGTG CTGCAGCTGC TGAAGATCAC CGGTGACTGG
CAGAAGTTCA AGGGCCTGCC CGGCGCCGAG GGCACGCTGA AGGTCAAGGA ACCCAAGCCG
TCCAAGCTGG ACCTGTTCAA CGCCGCGCTG GCCGAGGCCG AGGGCGGGCC GTCCACCGAG
GCCACCACGC CGAAGAAGAA GAAGGCCCCG GCCAAGAAGG ACGCGCCTGC CGAAGCAGCT
GAGGCGCCCG CCGAGGCTGA GGCGGCCGCC GAGTCCGACG CCCCCGCTGC AGAATGA
|
|---|
| Protein sequence | MAVKIKLARF GKIRNPQYRI AVADARNRRD GRAIEVIGRY HPKEEPSVIE IDSERAQYWL
GVGAQPTEPV LQLLKITGDW QKFKGLPGAE GTLKVKEPKP SKLDLFNAAL AEAEGGPSTE
ATTPKKKKAP AKKDAPAEAA EAPAEAEAAA ESDAPAAE
|
|---|
| |