Gene Mvan_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1951 
Symbol 
ID4645797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2085047 
End bp2086369 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content70% 
IMG OID639805438 
Productmajor facilitator superfamily transporter 
Protein accessionYP_952777 
Protein GI120402948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCGC ACACGGAGGG CGAGTGTCCA GGTGCGGACG CGAGGAGCAA TTCCGGCACT 
GCGGACGCGA AAAGCAGTTC ACAATCCGCG ACGAAGCAGC CGCTGCCCCG TGAAGTGTGG
GTGCTGGTAG CCGCCAACTT CGTGGTGGCA TTGGGATACG GGGTGGTCGC CCCGGTGTTG
CCGCAGTACG CCCGCCACTT CGGCGTCAGC ATCAGTGCCG CGACGTTCGT CATCACCGCG
TTCGCGGTGA TGCGTCTGGT CGGGGCCCCG CCGGCGGGGA TGCTCGTGCA GCGGCTGGGG
GAGCGGCGGG TCTACATCAG CGGCCTGATC ATCGTCGCGC TGTCCACCGC CGCGTGTGCC
TTCGCCGAAA CATATTGGCA GCTACTGCTT TTCCGGTCGC TGGGCGGGAT CGGCTCCGCG
ATGTTCACGG TGTCGTCGCT GGGGCTGATG ATCCGTATCT CGCCGCCCGA CGCGCGCGGC
CGGGTCGCCG GGCTGTTCTC GTCGGGGTTC ATGGTCGGCT CGGTGGGCGG ACCCATCCTG
GGCGCGCTGA CCGCCGGATT CGGGCTGTCG GCGCCGTTCC TGATCTACGG TGCGGCGCTG
CTGGTCGCCG CGACCGTCGT GTTCGTCAGC CTTCGTCATT CGACGGTGGT CGGGCAGCAG
GACGAGGACC CGGAGGAGCC GGTGCCCTTC CGCACGGTGT TCCGGCACCG GGCCTACCGG
GCGGCGCTGT TCTCCAACTT CGCGACGGGC TGGGCGTCGT TCGGCCTGCG CATCGCGCTG
GTGCCGCTGT TCATCGTGGA GGTGCTGGGT CAGAGCCCCG GCGCGGCCGG TCTGGCGCTG
ACCGCGTTCG CGGTCGGCAA CATCTCGGTC GTCATCCCCA GCGGCCATCT GTCGGACCGG
CTGGGACGCC GCAAGCTGAT GATCTTCGGC CTGACGCTGG CGGCGGCGTC CACCGCGCTG
GTGGGCTTCA CCACGTCGCT GCCCGTGTTT CTGGTGGCGG CCTACATCGC CGGGGCGGCC
ACCGGCATCT TCGTCTCCCC GCAGCAGGCC GCGGTCGCCG ACGTGGTGGG CAACAAATCG
CGGGGCGGGA CGGCGGTGGC GACGTTCCAG ATGATGGCCG ACTTCGGCTC GATCGGCGGA
TCACTTTTGG TCGGGCTGAT CGCGCAGTAC ACCTCGTTCG GGTGGGCCTT CCTGATCAGC
GGCGTCATCC TCGCGGTGGC GGCGGTGGGG TGGATCTTCG CTCCCGAGAC CCGGCCGCGG
GCGTCCACCG AGCACACGCA GGCCCGTCCG CTCGGCCCAG AGGCCGGCGG TGAAGTGCCG
TGA
 
Protein sequence
MTSHTEGECP GADARSNSGT ADAKSSSQSA TKQPLPREVW VLVAANFVVA LGYGVVAPVL 
PQYARHFGVS ISAATFVITA FAVMRLVGAP PAGMLVQRLG ERRVYISGLI IVALSTAACA
FAETYWQLLL FRSLGGIGSA MFTVSSLGLM IRISPPDARG RVAGLFSSGF MVGSVGGPIL
GALTAGFGLS APFLIYGAAL LVAATVVFVS LRHSTVVGQQ DEDPEEPVPF RTVFRHRAYR
AALFSNFATG WASFGLRIAL VPLFIVEVLG QSPGAAGLAL TAFAVGNISV VIPSGHLSDR
LGRRKLMIFG LTLAAASTAL VGFTTSLPVF LVAAYIAGAA TGIFVSPQQA AVADVVGNKS
RGGTAVATFQ MMADFGSIGG SLLVGLIAQY TSFGWAFLIS GVILAVAAVG WIFAPETRPR
ASTEHTQARP LGPEAGGEVP