Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1937 |
Symbol | |
ID | 4648174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 2072022 |
End bp | 2072726 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639805424 |
Product | HAD family hydrolase |
Protein accession | YP_952763 |
Protein GI | 120402934 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.67763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGCC CCATGAGTAT CGAAAAACCG TCCCCCGCAG TCCTTTTTGA CGTCGATGGG ACCCTGGTGG ATTCGAACTA TCTGCATGTG TACGCGTGGC TGCGCGCCTT TGATGCCGAA AGCGTTCCGG TGGACAGCTG GCGCATCCAC CGCTGCATCG GCATGGACGG CACCACGCTG GTGCGCGCCC TCGCCGGGGA TGCGAGTGAG CGCGTGCTCG ACACGCTCAA GGACCGCCAC AGCGAGTTCT ATCGGGAAAC CGCGAGTCTG CTCGCCCCGC TCCCCGGTGC GCGGGACCTG CTCCGCCGGG TCGCAGGACT GGGCCTGCAG GTCGTGTTGG CGACCTCGGC GCCCGAAGAC GAACTGCGAA TGCTGCGTGA GGTTCTCGAC TGCGACGATG CGGTGGCGGC GGTGACGTCA TCCCAAGACG TCGACACCGC CAAACCTCAG CCGGACATCG TGGCTGTGGC GCTCGACCGG GCCGGCGTGA CCGCCGACGA CGCGGTGTTC GTCGGTGACG CGGTGTGGGA CTGCGAGGCC GCCAGACGTG CCGGTGTGCC GTCGATAGGT GTGCTGAGCG GCGGCGTGTC CCGGGCCGAG CTGCGCGAGG CCGGCGCGAG GGACGTCTTC GAGGACGCCG CCGAGCTGCT GACCGAACTC GATTCCACCG TGGTCGGCGA GTTGGCCGGC CGCGTCAGTG GTTGA
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Protein sequence | MPRPMSIEKP SPAVLFDVDG TLVDSNYLHV YAWLRAFDAE SVPVDSWRIH RCIGMDGTTL VRALAGDASE RVLDTLKDRH SEFYRETASL LAPLPGARDL LRRVAGLGLQ VVLATSAPED ELRMLREVLD CDDAVAAVTS SQDVDTAKPQ PDIVAVALDR AGVTADDAVF VGDAVWDCEA ARRAGVPSIG VLSGGVSRAE LREAGARDVF EDAAELLTEL DSTVVGELAG RVSG
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