Gene Mvan_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1912 
Symbol 
ID4648002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp2040486 
End bp2041463 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID639805399 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_952738 
Protein GI120402909 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.476783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGTA ACCGACTGCT GGCATTCGAC CTGGCCTCGC GGTGGCACGG CTTCTGGCGG 
GGCGACATCG GGGTGTGGAT TCTCGACCGC GGTGTGCGCA TCGCGCTGTT GTTGATCGGC
GGTCTGCTGG CCGCGCGGTT CATCAACTGG GCGGCGCAGC GCATCACCCG CCGCATCGAC
GCCGAATATC AGGAGAGCGA TCAACTGGTG CGTTCGGAGA GCGCCAAACA CCGCCAGGCC
GTCGCGTCGG TGATCTCGTG GGTGTCGGTC GCGCTGCTGT TCGTGATGGT GGCGGTGCAG
ATCACCGACA TCCTCGCGAT TCCCATCGGC TCGCTGGTCG CACCTGCCGC GGTGATCGGC
GCCGCACTCG GTTTCGGCGC GCAGCGTCTC GTGCAGGACC TGCTCTCCGG TTTCTTCATC
ATCACCGAGA AGCAGTACGG CTTCGGTGAC CTCGTCGCGC TGACCGTCTC CGGCATCGCC
GCGCCGGCCG AGGGCACCGT GGAGGACGTC ACGCTGCGGG TCACGAAACT GCGCTCGGCA
GAAGGGGAGA TGTTCACCAT CCCCAACGGC CAGATCGTGA AGACGGTGAA CCTGTCCAAG
GACTGGGCCC GCGCGGTCAT CGACATCCCG GTGCCGACGT CGGCGGACCT CAACCTCGTC
AACGACGTGC TGCACGATGT CGCGCAGAAG GCCATCGACG ACTCGCAACT GCACGATCTG
CTGCTCGACC CGCCGCAGCT GATGGGCGTG GAGAGCATCG AGCTGGACAC CGTGAACCTG
CGGATGGTGG CTCGCACACT GCCCGGCAAG CAGTTCGAGG TGGGCCGGCG GCTGCGGGTG
CTCGTGATCA GGGAGCTGCG ACGCTCGGGC ATCGTGGCGC CGGGGGAGGC GCCACCCCCG
ACCGTCGGCG CGATCGTGCA CCCCGCCACG GCCGGCGGTG CCGAGGAGGA AACCCAGGGT
CCGGAGTCGA GGCGATGA
 
Protein sequence
MTSNRLLAFD LASRWHGFWR GDIGVWILDR GVRIALLLIG GLLAARFINW AAQRITRRID 
AEYQESDQLV RSESAKHRQA VASVISWVSV ALLFVMVAVQ ITDILAIPIG SLVAPAAVIG
AALGFGAQRL VQDLLSGFFI ITEKQYGFGD LVALTVSGIA APAEGTVEDV TLRVTKLRSA
EGEMFTIPNG QIVKTVNLSK DWARAVIDIP VPTSADLNLV NDVLHDVAQK AIDDSQLHDL
LLDPPQLMGV ESIELDTVNL RMVARTLPGK QFEVGRRLRV LVIRELRRSG IVAPGEAPPP
TVGAIVHPAT AGGAEEETQG PESRR