| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1807 |
|---|
| Symbol | |
|---|
| ID | 4644063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1918569 |
|---|
| End bp | 1920701 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639805295 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_952635 |
|---|
| Protein GI | 120402806 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.388525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.14229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGG CCATGTCCCC GACGGCCTCC CGCGACCGGC TGCTCGGTGA CCTCGACGAC
GAACAGCGTG AGGCTGTGCT CGCACCCCGC GGCCCGGTCT GCGTGCTCGC CGGCGCCGGT
ACCGGCAAGA CGCGCACAAT CACCCGCCGC ATCGCCCATC TGGTGACGGC CGGGCACGTC
GCCCCAGGAC AGGTGCTGGC GGTCACCTTC ACCCAGCGCG CGGCGGGTGA GATGCGGGGC
CGGTTGCGCG CACTCGGCGG CGACGAGGCA GGGGCGTCCA CTGCGGCGGT GCAGGCGCAG
ACGTTCCACG CCGCCGCGCG GCGCCAGCTG TCGTACTTCT GGCCGAGGGT CGTCGGCACC
ACCGACTGGC AGCTGATGGA CAGCAAGTTC GCCGTCGTCG CGCAGGCCGC CAACCGGGCC
GGGCTGCCCA CCGGCACCGA CAACGTCCGC GACCTCGCCG GTGAAATCGA ATGGGCCAAG
GCGTCTTTGA TCACGCCTGA GGGCTATCCG CAGGCCGTCG CCGACGTCGG CCGCGACATC
CCGTTCGACG CCGCCAAGGT CGCCGCCGTC TACGGCAACT ACGAGTCGCT CAAGTCCCGC
CGTAACGATG TCATGCTTCT AGACTTTGAC GACCTGCTGC TGCACACCGC CGCCGCGATC
GAGAACGACC CCGCGGTGGC CCAGGAGTTC CGGGACCGGT ACCGCTGCTT CGTGGTCGAC
GAGTACCAGG ACGTCACCCC GCTGCAGCAG CGGGTGCTCG ACGCCTGGCT CGGCGGCCGC
GACGACCTGA CCGTCGTCGG CGACGCGAAC CAGACCATCT ACTCGTTCAC CGGCGCCTCG
CCGCGCTACC TGCTCGACTT CTCGCGTCGC TTCCCCGACG CCGCGGTGGT CCGGCTGGAA
CGCGACTACC GCTCCACCCC GCAGGTGGTG TCGCTGGCCA ACCGCGTCAT CGCCGCCGCG
CGCGGCCGCA TGGCGGGCAG CAGGCTGCAC CTGGTCGGTC AACGCCCGCC GGGACCCGAC
CCGGTGTTCA AGGAGTACCC CGACGAGGTC GCCGAGGCCA CGGCCGTCGC CCGCAGCATC
GCCAAGCTCG TCGAATCCGG AACCGCCGCT TCGGAAATCG CGGTGCTCTA CCGCATCAAC
GCCCAATCGG AGGTCTACGA GGAGGCGCTC ACCGAGGCCG GCATCGCCTT CCAGGTCCGC
GGCGGTGAAG GGTTCTTCAG CCGTCAGGAG ATCCGGCAGG CGCTGCTGGC GTTGCAGCGG
CTCGCCGAGC GCGGCCTGCA GGACACGGCA GATTCGCTGC CGGAGTTCGT GCGCGCGGCG
CTCGAACCCC TCGGCCTGAC CGCCGAGCCG CCGCCGGGCG CGCAGGCCAG GGATCGCTGG
GAGGCGCTGG TCGCGCTCGC CGAGCTGGTC GACGACGAGG TGGCGCAGCG CCCGCAGCTG
GACCTGCACG GCCTGCTCGC CGAGTTGCGG CAGCGCGCCG ATTCCCGGCA CCCACCCGTC
GTGCAGGGCG TCACGCTGGC GTCGCTGCAC GCCGCGAAGG GCCTGGAGTG GGATGCGGTG
TTCCTCGTCG GGCTCGCCGA CGGCACACTG CCGATCTCGC ATGCGCTTGC CCATGGCCCC
GACAGTGAAC CGGTCGAGGA GGAACGTCGG CTGCTCTATG TCGGCGTCAC CAGGGCGCGC
GTGCATTTGA CGTTGAGTTG GGCGCTGGCC CGCAAGCCGG GCGGCAGGCA GGGTCGCCGT
CCGTCGCGGT TCCTCAACGG CATCGCGCCG CAGTCCCAGC GCGACGACGG CCCCAGCAAG
CCCCGCAAGC CGCGCGGGCC GGCCCCGCGC TGCCGGGTGT GCAACGCGGC GCTCACCTCG
CCGCCGGCCA TCATGTTGCG CCGCTGCGAA ACCTGCCCGT CCGACATCGA CGAGCAACTT
CTCGCCGACC TCAAGGACTG GCGGCTGCGG ATCGCCAAAG AGATGAACGT GCCGGCCTAT
GTGGTGTTCA CCGACAACAC GCTGATCGCG ATCGCCGAAT CGCTGCCGTC CGACGACGCG
GCGCTCGTGG CGATCCCCGG AATCGGCGCC CGCAAGCTCG AACAGTTCGG CCCCGACGTG
CTCGCACTGG TCAAAGGCCG CCAAAAATCG TAA
|
|---|
| Protein sequence | MMEAMSPTAS RDRLLGDLDD EQREAVLAPR GPVCVLAGAG TGKTRTITRR IAHLVTAGHV
APGQVLAVTF TQRAAGEMRG RLRALGGDEA GASTAAVQAQ TFHAAARRQL SYFWPRVVGT
TDWQLMDSKF AVVAQAANRA GLPTGTDNVR DLAGEIEWAK ASLITPEGYP QAVADVGRDI
PFDAAKVAAV YGNYESLKSR RNDVMLLDFD DLLLHTAAAI ENDPAVAQEF RDRYRCFVVD
EYQDVTPLQQ RVLDAWLGGR DDLTVVGDAN QTIYSFTGAS PRYLLDFSRR FPDAAVVRLE
RDYRSTPQVV SLANRVIAAA RGRMAGSRLH LVGQRPPGPD PVFKEYPDEV AEATAVARSI
AKLVESGTAA SEIAVLYRIN AQSEVYEEAL TEAGIAFQVR GGEGFFSRQE IRQALLALQR
LAERGLQDTA DSLPEFVRAA LEPLGLTAEP PPGAQARDRW EALVALAELV DDEVAQRPQL
DLHGLLAELR QRADSRHPPV VQGVTLASLH AAKGLEWDAV FLVGLADGTL PISHALAHGP
DSEPVEEERR LLYVGVTRAR VHLTLSWALA RKPGGRQGRR PSRFLNGIAP QSQRDDGPSK
PRKPRGPAPR CRVCNAALTS PPAIMLRRCE TCPSDIDEQL LADLKDWRLR IAKEMNVPAY
VVFTDNTLIA IAESLPSDDA ALVAIPGIGA RKLEQFGPDV LALVKGRQKS
|
|---|
| |