| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1660 |
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| Symbol | |
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| ID | 4645827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1765222 |
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| End bp | 1766010 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639805155 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_952495 |
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| Protein GI | 120402666 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGGT CGTCGTCCCA GGGTTCGTCG TCACGATCGG GCTCGGAGTA CGCGGACGTT
GCCCCGATGT TCCGCGAGCT GGCCGAGCTC GAGGAGGGGA CGGCGGCGTT TCAGCGTCAG
CGTGACCGCA TCGTCGAGCG CTGCCTGCCG TTGGCCGATC ACATCGCCCG CCGTTTCGAC
GGCCGCGGCG AGCCGCGTGA CGACCTCGTT CAGGTCGCAC GCGTCGGGCT GGTCAACGCC
GTGATCCGGT TCGATGTCAA CGCCGGTTCG GATTTCGTGT CGTTCGCGGT GCCGACCATC
ATGGGTGAGG TTCGCAGGCA CTTCCGTGAC AACAGTTGGT CGGTGAAGGT GCCGCGCCGG
CTCAAGGAGC TGCATCTGCG GCTGGGCGCG GCGACGGCCG AGCTGTCGCA GCGGCTGGGG
CGGGCGCCGA CGGCCACCGA GCTGGCCGCC GAGCTGGAGA TGGACCGCGA CGAGGTGGTC
GAGGGCCTGG TCGCGGGCAG CTCCTACAAC ACGTTGTCTA TCGACAGCGG CGGCAGCGGC
AACGAGGATG CGCCCGCGAT CGCCGACACG CTCGGGGACG TCGACCTGTC CCTGGATCAG
ATCGAGAACC GCGAGGCGCT GCGGCCGCTG CTGGCGGCGC TGCCCGAGCG CGAACGCACC
GTGCTGGCGC TGCGGTTCTT CGAGTCGATG ACGCAGACTC AGATCGCCGA GCGGGTCGGC
ATCTCGCAGA TGCACGTGTC CCGGTTGCTG GCCAAGTCGC TAGCGCGACT CCGCGACCAG
TTGGAGTGA
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| Protein sequence | MTRSSSQGSS SRSGSEYADV APMFRELAEL EEGTAAFQRQ RDRIVERCLP LADHIARRFD
GRGEPRDDLV QVARVGLVNA VIRFDVNAGS DFVSFAVPTI MGEVRRHFRD NSWSVKVPRR
LKELHLRLGA ATAELSQRLG RAPTATELAA ELEMDRDEVV EGLVAGSSYN TLSIDSGGSG
NEDAPAIADT LGDVDLSLDQ IENREALRPL LAALPERERT VLALRFFESM TQTQIAERVG
ISQMHVSRLL AKSLARLRDQ LE
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