| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1624 |
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| Symbol | |
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| ID | 4646369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1725130 |
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| End bp | 1725900 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639805119 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_952459 |
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| Protein GI | 120402630 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0419778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGCG CTTCGTTCGA CCGGCTGTTC GACATGACCG ACCGGACCGT CGTCGTCACC
GGCGGCACCC GCGGGATCGG GCTGGCGCTG GCCGAGGGGT ATGTACTGGC GGGTGCGCGC
GTCGTGGTGG CCAGCCGTAA GGCCGATGCC TGTGAGGAGA CGGCCCGGCA CCTGCGGGAG
CTGGGCGGCT CGGCGATCGG GGTACCCACC CATCTCGGCG AGGTCGACGA CCTCGGCGCG
CTCGTCGAGC GCACCGTCGC CGAGTTCGGC GGGGTGGACG TGCTGGTCAA CAACGCGGCC
AATCCGTTGG CGCAGCCGTT CGGGTACATG ACCGTCGACG CGCTGACGAA GTCGTTCGAG
GTGAATCTGC GCGGCCCGGT GATGCTCGTG CAGGAGGCAC TGCCGCACCT GAAGGCCAGC
GAGCATGCCG CAGTGCTGAA CATGGTGTCC GTCGGCGCGT TCATCTTCGC GCCGATGTTG
TCGATCTACG CGTCGATGAA GGCCGCCATG ATGTCGTTCA CCCGGTCGAT GGCAGCCGAG
TTCGTCCATC ACGGCATCCG GGTCAACGCG TTGGCGCCCG GACCGGTGGA CACCGACATG
ATGCGCAAGA ATCCGCAGGA GGCGATCGAC GGGATGGTCG GCGGCACGCT GCTGGGCCGG
TTGGCGACCC CTGACGAAAT GGTCGGCGCC GCACTGCTTC TGACATCGGA TGCCGGAAGC
TACATCACCG GCCAGGTCAT CATCGCCGAC GGCGGCGGCA CCCCGCGCTG A
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| Protein sequence | MDRASFDRLF DMTDRTVVVT GGTRGIGLAL AEGYVLAGAR VVVASRKADA CEETARHLRE
LGGSAIGVPT HLGEVDDLGA LVERTVAEFG GVDVLVNNAA NPLAQPFGYM TVDALTKSFE
VNLRGPVMLV QEALPHLKAS EHAAVLNMVS VGAFIFAPML SIYASMKAAM MSFTRSMAAE
FVHHGIRVNA LAPGPVDTDM MRKNPQEAID GMVGGTLLGR LATPDEMVGA ALLLTSDAGS
YITGQVIIAD GGGTPR
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