Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1436 |
Symbol | |
ID | 4647107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1525930 |
End bp | 1526982 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639804936 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_952276 |
Protein GI | 120402447 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.763793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTT CACAGCGCCC CACCCTCAGC GAAGATGTGC TGGCCGAGAA CCGGTCCCAG TTCGTCATCG AGCCGCTGGA GCCCGGATTC GGTTACACCC TCGGGAACTC GCTGCGCCGC ACGCTGCTGT CGTCCATCCC GGGCGCGGCC GTCACCAGCA TCCGCATCGA CGGTGTGCTG CACGAGTTCA CCACCGTGCC CGGGGTCAAG GAAGACGTCA CCGACATCAT CCTGAACCTC AAGGGTCTGG TCGTGTCCTC CGAGGAGGAC GAGCCGGTCA CCATGTACCT GCGCAAGCAG GGACCGGGTG AGGTCACCGC GGGTGACATC GTGCCGCCGG CCGGCGTCAC GGTGCACAAC CCCGACATGC ACATCGCCAC CCTGAACGAC AAGGGCAAGC TCGAGGTCGA GCTGGTCGTC GAGCGCGGCC GCGGCTACGT GCCTGCCGTG CAGAACAAGG CCTCCGGCGC CGAGATCGGC CGCATCCCGG TCGATTCGAT CTACTCGCCG GTGCTCAAGG TCACCTACAA GGTGGAGGCC ACCCGTGTCG AGCAGCGCAC CGACTTCGAC AAGCTGATCC TCGACGTCGA GACCAAGAAC TCGATCACCC CGCGTGACGC GCTGGCTTCG GCCGGTAAGA CGCTGGTCGA ATTGTTCGGT CTGGCACGGG AACTCAACGT CGAGGCCGAG GGCATCGAGA TCGGCCCGTC GCCGGCGGAG GCCGATCAGG CCGCGCACTT CGCGCTGCCG ATCGACGATC TGGACCTGAC GGTGCGGTCG TACAACTGCC TCAAGCGCGA GGGTGTGCAC ACCGTGGGCG AGCTCGTGGC CCGCACGGAG TCCGATCTGC TGGACATCCG TAACTTCGGC CAGAAGTCCA TCGACGAGGT GAAGATCAAG CTGCACCAGT TGGGTCTGTC GCTCAAGGAC AGCCCGGCCA GCTTCGATCC GTCCGAGGTG GCCGGCTACG ACGTCGCCAC CGGCACGTGG AACAGCGACG CCGGCTACGA CCTGGAGGAC AACCAGGACT ATGCCGAAAC CGAACAGCTC TAG
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Protein sequence | MLISQRPTLS EDVLAENRSQ FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL HEFTTVPGVK EDVTDIILNL KGLVVSSEED EPVTMYLRKQ GPGEVTAGDI VPPAGVTVHN PDMHIATLND KGKLEVELVV ERGRGYVPAV QNKASGAEIG RIPVDSIYSP VLKVTYKVEA TRVEQRTDFD KLILDVETKN SITPRDALAS AGKTLVELFG LARELNVEAE GIEIGPSPAE ADQAAHFALP IDDLDLTVRS YNCLKREGVH TVGELVARTE SDLLDIRNFG QKSIDEVKIK LHQLGLSLKD SPASFDPSEV AGYDVATGTW NSDAGYDLED NQDYAETEQL
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