Gene Mvan_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1320 
Symbol 
ID4643778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1410078 
End bp1410773 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content75% 
IMG OID639804820 
Producthypothetical protein 
Protein accessionYP_952160 
Protein GI120402331 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.215016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGGCGG ACGCTCCCGC CGACCGGGCG CTGGCCGCGA CCGTCGCGCT GACGTTCGTC 
ACCGGCGTCG TCGACGCGGT CGGCTTCCTG GGCCTGGACC GGGTGTTCAC CGGCAACATG
ACCGGCAACA TCGTGATCCT CGGCATGGGT GTCGCCGGCG CCGACGAACT GCCGGTGCTG
GGTCCGGCGG TCGCGCTGGG CGCGTTCACG GCCGCGGCGT ACCTCGCCGG ACTGGTGTTG
CGCGGTCCCG GCGGCGCCCG CCAACCGGGC TGGCAGCACC GGGTGACGGT GCTGCTCACG
CTGGGCGCGG CGACCTTGAC GGTGCTGACG GTGGTCGCCG TCGTCACCGG CAGGCATCCC
GAGCCCGTCG TGCAGATCCC GATGGCCGCC GCCACCGCGG CGGTGATGGG CTCCCAGGCG
ATGGTCGCGC GCGCCGTCGC CGTCGCCGAC ATGACCACCG TCGTCGTCAC CTCGACGTTG
GCCTCGCTGG CCGGGGAGAC GTGGACGCGC GGTGGCCGGG GCGCAGTGGC CAACCGGCGC
CTGGCCGCCA TCGTGGTGAT CTTCGCCGGC GCCGTCGTGG GTGCTCTGCT GATGCGGATC
CACATCGCCG TGCCCTTCGG GCTGGCCGCC GCGACGACCG CGGCCGTCGC CCTCCTCGGC
CATCTGCGGC TGTCGCCGCC GGTCCGGTCG CGGTAG
 
Protein sequence
MMADAPADRA LAATVALTFV TGVVDAVGFL GLDRVFTGNM TGNIVILGMG VAGADELPVL 
GPAVALGAFT AAAYLAGLVL RGPGGARQPG WQHRVTVLLT LGAATLTVLT VVAVVTGRHP
EPVVQIPMAA ATAAVMGSQA MVARAVAVAD MTTVVVTSTL ASLAGETWTR GGRGAVANRR
LAAIVVIFAG AVVGALLMRI HIAVPFGLAA ATTAAVALLG HLRLSPPVRS R