| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1304 |
|---|
| Symbol | rpsJ |
|---|
| ID | 4643762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 1399250 |
|---|
| End bp | 1399555 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639804804 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_952144 |
|---|
| Protein GI | 120402315 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.155802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.101468 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGAC AAAAGATCCG CATCAGGCTC AAGGCCTACG ACCATGAGGC CATTGACGCC
TCTGCGCGCA AGATCGTCGA GACGGTCACC CGGACGGGCG CCAGCGTGGT CGGCCCGGTG
CCGCTGCCGA CCGAGAAGAA CGTGTACTGC GTCATCCGGT CCCCGCACAA GTACAAGGAC
TCGCGGGAGC ACTTCGAGAT GCGGACGCAC AAGCGGCTGA TCGACATCCT CGACCCCACG
CCGAAGACCG TTGACGCCCT GATGCGCATC GATCTGCCGG CCAGCGTCGA CGTCAACATT
CAGTAG
|
|---|
| Protein sequence | MAGQKIRIRL KAYDHEAIDA SARKIVETVT RTGASVVGPV PLPTEKNVYC VIRSPHKYKD
SREHFEMRTH KRLIDILDPT PKTVDALMRI DLPASVDVNI Q
|
|---|
| |