Gene Mvan_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1287 
Symbol 
ID4648421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1380033 
End bp1381244 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID639804787 
Productornithine aminotransferase 
Protein accessionYP_952127 
Protein GI120402298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR01885] ornithine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.208991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGG GCATTATGGG CAACACCGAG GCAACCATCG AGCTCGACCA CCGCCATGTC 
GCGCACAACT ACGCCCCGCT GCCCGTCGTC GCCGCCAGCG CCGAGGGCGC CTGGATCACC
GACGTCGAGG GGCGACGCTA TCTCGACTGC CTGGCCGCCT ACTCGGCGGT GAATTTCGGG
CACCGCAATC CCGAGGTGAT CGCGACGGCG CACGCGCAAC TCGACGCCGT CACCCTGGTC
AGCCGCGCGT TCCACTCCGA CCGGCTCGCG CCGTTCTGCG CGGCGCTGGC CGACTTGTGC
GGCAAGGACA TGGTGCTGCC GATGAACAGC GGCGCCGAGG CCGTGGAGAG CGGCATCAAG
GTGGCCCGCA AGTGGGGCGT CGACGTCAAG GGAGTCAAAA CCCCGAACAT AGTTGTGGCG
CACAACAACT TCCACGGCCG CACCACCACG ATCATCAGCT TCTCCGACGA CGAGACCGCC
CGTCGGGGCT TCGGCCCGTA CACCCCGGGG TTCCGGTCGG TGCCGTTCGG GGACGCCGAC
GCACTCGCCC CGGCGGTCGA CGACGACACC GTCGCCGTGC TGATCGAACC GATCCAGGGT
GAGGCGGGGA TCATCGTCCC GCCCGACGAC TACCTGCCGC GGGTGCGTGC GCTGTGCACC
GAACGCAACG TGCTGATGAT CGCCGACGAG ATCCAGTCGG GCCTCGCGCG CACCGGCCGC
ACCTTCGCGT GCGACCACTG GGGCGTCGTC CCCGATATCT ACCTGCTGGG CAAGGCCCTC
GGCGGCGGAG TCCTACCGCT GTCGGCGGTG GTGGCCGACC GTGACATCCT CGGCGTGCTG
CATCCCGGCG AGCACGGCTC GACGTTCGGC GGCAATCCCC TGGCCGCCGC GATCGGCAGC
ACCGTCGTCG ACATCCTGCG CCGCGGCGAA TTCCAGAGAC GCTCAACCGA ACTCGGCGCC
CATCTACACG CTCGGCTGAA CGGCCTGAAA GGGCGGGGAG TGCTGGCGGT GCGCGGCAGA
GGGCTGTGGG CCGGTGTCGA CATCGACCCG GCGCACGGCA CCGGCAAGCA GGTGAGCCTG
CGCCTGGCCG AACGCGGTGT ACTCGTCAAG GACACCCACG GATCGACGCT GCGCTTCGCG
CCGCCGTTGG TGATCACCGC CGACGAGATC GACTGGGCGA TCGACCGATT CGCCGAAGTG
CTGGGCCGCT AG
 
Protein sequence
MTVGIMGNTE ATIELDHRHV AHNYAPLPVV AASAEGAWIT DVEGRRYLDC LAAYSAVNFG 
HRNPEVIATA HAQLDAVTLV SRAFHSDRLA PFCAALADLC GKDMVLPMNS GAEAVESGIK
VARKWGVDVK GVKTPNIVVA HNNFHGRTTT IISFSDDETA RRGFGPYTPG FRSVPFGDAD
ALAPAVDDDT VAVLIEPIQG EAGIIVPPDD YLPRVRALCT ERNVLMIADE IQSGLARTGR
TFACDHWGVV PDIYLLGKAL GGGVLPLSAV VADRDILGVL HPGEHGSTFG GNPLAAAIGS
TVVDILRRGE FQRRSTELGA HLHARLNGLK GRGVLAVRGR GLWAGVDIDP AHGTGKQVSL
RLAERGVLVK DTHGSTLRFA PPLVITADEI DWAIDRFAEV LGR