Gene Mvan_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1282 
Symbol 
ID4648416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1374740 
End bp1375930 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID639804782 
Productelongation factor Tu 
Protein accessionYP_952122 
Protein GI120402293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0674069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.99115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGG CGAAGTTCGA GCGGACGAAG CCGCACGTCA ACATCGGGAC CATCGGTCAC 
GTTGACCACG GCAAGACCAC GCTGACCGCA GCAATCACCA AGGTTCTGCA CGACAAGTAC
CCCGATTTGA ACGAGTCGCG CGCATTCGAC CAGATCGACA ATGCGCCCGA GGAGCGTCAG
CGCGGTATCA CGATCAACAT CTCCCACGTG GAGTACCAGA CCGACAAGCG TCACTACGCG
CACGTTGACG CCCCCGGTCA CGCTGACTAC ATCAAGAACA TGATCACCGG TGCCGCCCAG
ATGGACGGCG CGATCCTGGT GGTCGCCGCC ACTGACGGCC CCATGCCGCA GACCCGCGAG
CACGTGCTGC TCGCCCGCCA GGTCGGCGTG CCCTACATCC TGGTGGCCCT GAACAAGGCC
GACATGGTGG ACGACGAGGA GCTCATCGAG CTCGTCGAGA TGGAGGTCCG CGAACTGCTG
GCCGCCCAGG ACTTCGACGA GGAAGCCCCG GTCGTCAAGG TCTCGGCGCT CAAGGCGCTC
GAGGGTGACG AGAAGTGGGT CAAGTCCGTC GAGGAGCTCA TGGAGGCCGT CGACGAGTCG
ATCCCGGATC CGGTTCGCGA GACCGACAAG CCGTTCCTGA TGCCCGTCGA GGACGTCTTC
ACCATCACAG GCCGCGGCAC CGTGGTCACC GGTCGTGTGG AGCGCGGCAT CATCAACGTG
AACGAGGAAG TCGAGATCGT CGGCATCCGT CCCGACACCA CCAAGACCAC GGTCACCGGT
GTCGAGATGT TCCGTAAGCT GCTCGATCAG GGCCAGGCCG GTGACAACGT CGGTCTGCTG
CTGCGCGGCA TCAAGCGTGA GGACGTCGAG CGTGGCCAGG TTGTGGTCAA GCCCGGCACC
ACCACGCCGC ACACCGATTT CGAGGGCAGC GTCTACATCC TGTCCAAGGA CGAGGGTGGC
CGCCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGCAC CACGGACGTG
ACCGGCGTTG TGACCCTGCC CGAGGGCACC GAGATGGTGA TGCCCGGTGA CAACACCGAC
ATCTCCGTCA AGCTGATCCA GCCCGTCGCC ATGGACGAGG GCCTGCGCTT CGCGATCCGC
GAGGGCGGCC GTACCGTCGG CGCCGGCCGG GTTACGAAGA TCATCAAGTA G
 
Protein sequence
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKVLHDKY PDLNESRAFD QIDNAPEERQ 
RGITINISHV EYQTDKRHYA HVDAPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTRE
HVLLARQVGV PYILVALNKA DMVDDEELIE LVEMEVRELL AAQDFDEEAP VVKVSALKAL
EGDEKWVKSV EELMEAVDES IPDPVRETDK PFLMPVEDVF TITGRGTVVT GRVERGIINV
NEEVEIVGIR PDTTKTTVTG VEMFRKLLDQ GQAGDNVGLL LRGIKREDVE RGQVVVKPGT
TTPHTDFEGS VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGVVTLPEGT EMVMPGDNTD
ISVKLIQPVA MDEGLRFAIR EGGRTVGAGR VTKIIK