Gene Mvan_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_1240 
Symbol 
ID4646884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp1324807 
End bp1325709 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID639804741 
Productalpha/beta hydrolase fold 
Protein accessionYP_952081 
Protein GI120402252 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.17737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GCTCCGGCAC GGCCAAGTCC GGCGACCTGG ACATCTTCTA CGAGGACATG 
GGCGACCCCA ACGACCCGGC AGTCCTGTTG ATCATGGGCC TGGGCGCCCA GTTGTTGTTG
TGGCGCAACG GTTTCTGCGA GAAGCTCATC AACCAGGGAC TTCGGGTGAT CCGGTTCGAC
AACCGCGACG TCGGGTTGTC GTCGAAGCTG CACCATCACC GTTCCGGCGC CCCGCTGCTG
CCCCGGATGG CGCGGTCGTT CGTCGGGCGC CCCAGCCCGG CGGCGTACAC GCTGGAGGAC
ATGGCCGACG ACGCGGCGGC ACTGCTCGAC CATCTCGGCA TCGACACCGC CCACGTGGTC
GGCGGCTCGA TGGGCGGGAT GATCGCCCAG GTCTTCGCCG CCCGCCATCG CGCCCGCACC
GGGGCGCTCG GCGTGATCTT CTCCAGCAAC AACCAGGCGG CACTGCCCCC GCCCGGGCCG
CGTCAACTCG CGGCAATTCT GCAGCGCCCC AAGGGTTCTG ACCGGGAGGC GATCATCGAG
AACGCGGTGC GGGTCAGCAG GATCATCGGC AGCCCCGGCT ATCCGGCGGC CGAAGAACGG
CTGCGCGCCG ACGCGATCGA AGGCTACGAC CGCAGCTACT ACCCGGCCGG GGTGGGCAGG
CATTTCGCGG CGATTCTGGG CAGCGGCAGC CTGCGGCGCT ACGACCGCCA GATCACCGCT
CCGACGGTCG TCATTCACGG CACGGCGGAC AAACTGATGC GGCCCTCCGG CGGCCGTGCG
ATCGCCCGCG CGATCCCACG GGCCCGCCTC GTTCTCTTCG ACGGAATGGG TCACGAACTT
CCCGAACCGC TGTGGGACGA CATCGTCGGA GAACTGAAGA CCACATTCGC CGAAATTTCT
TGA
 
Protein sequence
MQIRSGTAKS GDLDIFYEDM GDPNDPAVLL IMGLGAQLLL WRNGFCEKLI NQGLRVIRFD 
NRDVGLSSKL HHHRSGAPLL PRMARSFVGR PSPAAYTLED MADDAAALLD HLGIDTAHVV
GGSMGGMIAQ VFAARHRART GALGVIFSSN NQAALPPPGP RQLAAILQRP KGSDREAIIE
NAVRVSRIIG SPGYPAAEER LRADAIEGYD RSYYPAGVGR HFAAILGSGS LRRYDRQITA
PTVVIHGTAD KLMRPSGGRA IARAIPRARL VLFDGMGHEL PEPLWDDIVG ELKTTFAEIS