Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1212 |
Symbol | |
ID | 4644259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1298688 |
End bp | 1299404 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639804710 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_952053 |
Protein GI | 120402224 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.305044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.539797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA CAGGACAGAC CGCGCTGATC ACCGGCGGCA CCGCCGGGAT CGGCCTCGCG TGCGCACAGC TGATGGCGCG CGAGGGCGCC GACGTGGTGA TCACCGGACG CGACCCCGGC CGGGGCGAGG CCGCCGCCGC GTCCGATCCC CGTCTGCGCT TCCTGCGGTG TGACCTGGCA GATCGAACAT CGATCGAATC CCTTGTGCAG CAAGCACCCC CGGTCGACAT CCTGGTCAAC AACGCCGCCA GCTTCCCGGG CGCGATGACC GTGGACCAGG ACGCCGCGAC GTTCCAGCGC ACGTTCGACA CCAACGTCGG CGGCACCTAC TTCCTCACCG CTGCCGTGGT CCCGGCGATG CTGCTCAGGG GCCGCGGGGC GATCGTCAAC GTCACGTCGA TGGTGGCGTG GAAGGGCGTT CCCGGCGCCT CGGTGTACAG CGCGTCCAAA GCCGCCGTCG AGTCCCTGAC CCGCACCTGG GCCGCCGAGT TCGCGCCGCA CGTCCGGGTC AACAGTGTCG CCCCCGGACC GACCGACACC GAAGGCGTCG TCGCGGAATG GGGCGACACC AACGACGAGT TGGGGCGCGC GCTGCCGCTG GGCCGCACCG CCACGCCCGG GGAGATCGCG CAGGCGGTGC TGTTCCTGGC CTCACCGCGC GCCGGCTTCG TCACCGGCTC GGTGCTGCAC GCCGACGGCG GCGGCACGGC CATCTGA
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Protein sequence | MELTGQTALI TGGTAGIGLA CAQLMAREGA DVVITGRDPG RGEAAAASDP RLRFLRCDLA DRTSIESLVQ QAPPVDILVN NAASFPGAMT VDQDAATFQR TFDTNVGGTY FLTAAVVPAM LLRGRGAIVN VTSMVAWKGV PGASVYSASK AAVESLTRTW AAEFAPHVRV NSVAPGPTDT EGVVAEWGDT NDELGRALPL GRTATPGEIA QAVLFLASPR AGFVTGSVLH ADGGGTAI
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