Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1161 |
Symbol | |
ID | 4646550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1234271 |
End bp | 1236112 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639804659 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_952002 |
Protein GI | 120402173 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.38486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGA GGTCACGGAC GGTCACCCAT GGGCGGAACA TGGCGGGGGC GCGGTCGTTG CTGCGCGCGG CGGGTGTGGA CGGCGCCGAC ATCGGCAAGC CGATCGTGGC GGTCGCAAAC AGCTTCACCG AGTTCGTGCC GGGCCACACC CATCTGCAGC CGGTGGGGCG CATCGTCTCC GAGGCGGTCA CGGCCGCGGG CGGGGTGCCG CGCGAGTTCA ACACCATCGC CGTCGACGAC GGCATCGCGA TGGGCCACGG CGGCATGCTG TACTCGCTGC CGAGCCGAGA TCTGATCGCC GACTCGATCG AGTACATGGT CAACGCGCAC CGCGCCGACG CGCTGGTGTG TATCTCCAAC TGCGACAAAA TCACTCCCGG CATGCTGATG GCCGCGCTGC GGCTGAACAT CCCGACGGTG TTCGTGTCCG GCGGGCCGAT GGAGGGCGGC ACCGCCGTGC TGGTCGACGG CACCGTGCGC ACCCGGCTGA ACCTAATCTC GGCGATCGCC GACGCGGTCG ACACGACGGT GTCGGACCGG GATCTGGCGC GTATCGAGGA GTCGGCGTGC CCGACGTGCG GATCCTGCTC GGGGATGTTC ACCGCGAACT CGATGAACTG CCTGACCGAG GCACTGGGTC TGGCGCTGCC GGGCAACGGT TCGGTGCTGG CGACCCACAC CGCGCGCCGC GCACTCTACG AGGACGCCGG AGCCACCGTC ATGGATCTGT GCCGGCGCTA TTACGACGAG GACGACGCGA GCGTGCTGCC GCGCGCGATC GCGAATCGCG ACGCATTCGA CAACGCGATG GCGATGGACA TCGCGATGGG CGGCAGCACC AACACGATCC TGCACCTGCT GGCCGCCGCC CGCGAGGCCG AGTTGGATTA CACGCTGGAG GACATCGAGA AGCGCAGCCG GGCGGTGCCG TGCCTGTGCA AGGTGGCACC CAATGGGCAT TACCTGATGG AGGACGTGCA CCGGGCGGGC GGGATCCCGG CGATCCTCGG CGAGTTGTGG CGAGGCGGCC ACCTTCATGA GACCGTGCAC TCGGTGCACT CCCGGTCGCT GGCGCAGTGG TTGCGCCGCT GGGACATTCG CGGCGGATCC GCGTCTCCGG AAGCGGTCGA GTTGTTTCAT GCCGCACCGG GATGCGTGCG GTCGGCGTCG GCGTTCAGCC AGTCGCAACG GTGGGACACC CTCGACACCG ACGCCGAAGA GGGCTGCATT CGCGATGTGC AGCATGCCTA TTCGGCAGAC GGTGGGCTCG CGGTGTTGCG GGGGAACCTC GCGGTGGACG GGTGCATCGT CAAAACCGCG GGGGTGGACG AGTCGATGCT GACGTTCACG GGTCCGGCCG TCGTGGTGGA GTCGCAGGAG GGAGCGGTCG AGGCGATCCT GAATGGCCGG GCGCGGCCGG GCGATGTGGT GGTGGTGCGC TACGAGGGCC CCAAGGGTGG GCCGGGGATG CAGGAGATGC TTTATCCCAC TTCTTATCTG AAAGGACGCG GGCTGGCCAC GGTGTGCGCG CTGGTTACCG ACGGCCGGTT CTCCGGCGGT TCGTCGGGCC TGTCGATCGG CCACGTCTCG CCCGAGGCCG CGGCCGGGGG CGTGATCGCG CTGATCGAGG ACGGGGACAC GATCACGATC GACATCCCGC ACCGCACCAT TGCCCTCGAT GTCGGCGACG ACGAACTACA GCGGCGTCGG GCCGCGCTGC AGGCGTCCGG TGGCTACCGG CCGCGTGATC GTCAACGGGT GGTGTCGGCG GCGTTGCGGG CGTATGCCGC GCTTGCGATG TCGGCCGACA AGGGCGCGGT GCGCGACGTC AGTGCGGTGT GA
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Protein sequence | MELRSRTVTH GRNMAGARSL LRAAGVDGAD IGKPIVAVAN SFTEFVPGHT HLQPVGRIVS EAVTAAGGVP REFNTIAVDD GIAMGHGGML YSLPSRDLIA DSIEYMVNAH RADALVCISN CDKITPGMLM AALRLNIPTV FVSGGPMEGG TAVLVDGTVR TRLNLISAIA DAVDTTVSDR DLARIEESAC PTCGSCSGMF TANSMNCLTE ALGLALPGNG SVLATHTARR ALYEDAGATV MDLCRRYYDE DDASVLPRAI ANRDAFDNAM AMDIAMGGST NTILHLLAAA REAELDYTLE DIEKRSRAVP CLCKVAPNGH YLMEDVHRAG GIPAILGELW RGGHLHETVH SVHSRSLAQW LRRWDIRGGS ASPEAVELFH AAPGCVRSAS AFSQSQRWDT LDTDAEEGCI RDVQHAYSAD GGLAVLRGNL AVDGCIVKTA GVDESMLTFT GPAVVVESQE GAVEAILNGR ARPGDVVVVR YEGPKGGPGM QEMLYPTSYL KGRGLATVCA LVTDGRFSGG SSGLSIGHVS PEAAAGGVIA LIEDGDTITI DIPHRTIALD VGDDELQRRR AALQASGGYR PRDRQRVVSA ALRAYAALAM SADKGAVRDV SAV
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