Gene Mvan_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0898 
Symbol 
ID4643620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp924285 
End bp925898 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content63% 
IMG OID639804398 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_951742 
Protein GI120401913 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA ACACGATTAA GACTGAAACG ACGGTCGTCG GTCTCCTCCG GAAGTGCGTC 
GACGAGCACC CCGACACGCT CTTCCTGGAT CTCGCCGGTG ACACATACAG TTATGCCGAT
GTGTGGCAGC GCTCGTGCGA CCTCGCGGGA ATGCTGCACG CGGGCGGTGT CGGTGCAGGA
CAGACGGTCG TCAGCCTGCA GGACACTCAG ATCGACGCGA TTGCATCTTG GTTCGGCGCC
AACATGCTTG GCGCCATCTG GGTGGGGACC AACACCGCCC TGCGAGGTGA GTTCCTGCGA
CACGTCATCA CCGATACCGG CGCCAGGGTC GTCGTCGCGG AGGCCGACCT GGTCGACCGG
ATCAGGGCCA TCGGCCAGCA TCTGCCCGAC GTCGATCTCG TCCTGCAACG TGGAGACGAA
AGGCCGGCCG CCGATCCCCA CTTGCGCATC GAGCGGCTCG TTGATCTTGG CGGGCACACA
GTCAACGAGC CGGGTGACGG CGCGGTCGAC GACCTCACCT GCCTGACCTA CACCGGTGGC
ACGACAGGAC CCTCGAAGGG CTGCATGATC AGCAATGGGT ATGCGATCAA CATCGCCCGG
CGCGGTCTCG CCCAGACGCA ACGTCAAACC GACGAGCTCA ACTGGAGCCC GCTGCCGATG
TTCCATCTCA ACGTTCTGGC GATGACGTTG ATCGGCACGA TGCTCGTCGG CGGAAGTGCG
GCACTCGCAC AACGCTTTTC AGCGTCCCGC TTCTGGCCCG AAATCGAGCG CACGGGCGCA
CGTGTCGTCA ACCTCATCGG TGGCCTGCCT GCCATTCTCG CCCAGCAGCC TGACACACTC
GAGATGGCGC GGTGTTTCGG GCAGATCCGA ATGGTCCATG CCGTGCCGTT CCCGCCAGCG
TTGCAGGAGA TCTGGCGAAA TCGGTTCGGC GTCAAGGTTC CAGGGTCCAA GGGTTATGGC
ATGACTGAGG TGTTCCCCAT CACCTACCAG ACGCCGGACG AACAGTCACC GGCAGAGTCG
GCGGGCAGGA TCAACCACGA AGACCTGGAG GTCCGGATCG TCGATGAACG CGACGATGAC
GTGAAGCCCG GCGAGGTGGG TGAAGTGATC TGTCGCCCCA GGCGATCCCA CGTGATGTTC
CAGGGCTACT GGCGACGGCC GGACGCCATG GTCGATTCCT GCCGCAACCT GTGGTTCCAC
ACGGGGGACC TCGGTCGAAT CGATGATGCC GGATACTTCT ACTTCGCCGA TCGCAAGCAC
GACTATCTGA GGCGGCGCGG TGAGAACATC TCGAGTCAGG AACTCGAGAC GACGTATGTG
GCCCATCCGG ACATCGTCGC CGTGGCGGTC CACGCGGTGC CATCGGAGCT CACCGAGGAC
GATGTCAAGG TGACCGTGGT GCTGCGACCC GGTTCCGTGC TGACGCCGGC CGAACTGTTC
GAGTGGTCGA AGGAACGCGT GCCCTACTTC GCCCTACCCC GCTATGTCGA GTTCCGCACC
GAGTTGCCGA CCAGCCCGCT GGGCAGAGTG CACAAATACC TGCTGCGTGA GCAGGGCTGC
ACACCGGAAA CCTGGGACCG CGAAGCCGCC GGTGTGTCAT GGGATCGGCG ATGA
 
Protein sequence
MKDNTIKTET TVVGLLRKCV DEHPDTLFLD LAGDTYSYAD VWQRSCDLAG MLHAGGVGAG 
QTVVSLQDTQ IDAIASWFGA NMLGAIWVGT NTALRGEFLR HVITDTGARV VVAEADLVDR
IRAIGQHLPD VDLVLQRGDE RPAADPHLRI ERLVDLGGHT VNEPGDGAVD DLTCLTYTGG
TTGPSKGCMI SNGYAINIAR RGLAQTQRQT DELNWSPLPM FHLNVLAMTL IGTMLVGGSA
ALAQRFSASR FWPEIERTGA RVVNLIGGLP AILAQQPDTL EMARCFGQIR MVHAVPFPPA
LQEIWRNRFG VKVPGSKGYG MTEVFPITYQ TPDEQSPAES AGRINHEDLE VRIVDERDDD
VKPGEVGEVI CRPRRSHVMF QGYWRRPDAM VDSCRNLWFH TGDLGRIDDA GYFYFADRKH
DYLRRRGENI SSQELETTYV AHPDIVAVAV HAVPSELTED DVKVTVVLRP GSVLTPAELF
EWSKERVPYF ALPRYVEFRT ELPTSPLGRV HKYLLREQGC TPETWDREAA GVSWDRR