Gene Mvan_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0887 
Symbol 
ID4643609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp915941 
End bp916606 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID639804387 
Producthypothetical protein 
Protein accessionYP_951731 
Protein GI120401902 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGG TCGGCGTTCT GGTGGTCGCC AAGGCCCCGG TGCCCGGGCT GGCGAAAACC 
CGCCTGGCCG CTGCGCTCGG CGCCGACGTG GCCGCCGACA TCGCGGCGGC CGCCCTGCTG
GACACCCTCG ACGCGGTGGC CGACTGCCCG GCGGCCGCGA AGGTGGTGGC GCTGACGGGA
AATCTGGACG ACGCGCGGTG CGCCGACGAG ATCCGTTCGC GTCTCGACAA TTTCATTGTG
ATTGGGCAGC GCGGTGCAGA TCTCGCCGAG CGGTTGGTCC ATGCGCATCG CGATGCCGCC
GCGGCTACCG GCGGGCTGCC GATTGTTCAG ATCGGGATGG ACACCCCGCA GGTGAGCCCC
GAACTGCTCG AGCGGTGCGC GCAGTCCCTT CTCGGCAGCG ACGCCGTCCT GGGGCTGGCG
GGCGACGGCG GTTGGTGGGT GCTGGGTGTG CGCGACGCCG GGTTCGCCGA GTGCCTGCGC
AATGTGCCGA TGTCTACGCC GGACACCGGT GCTGTAACGC TGGCGGCGCT GCAGGACACC
GACATCCATG TGGAACTCGT GTGTGAGCTC GTCGACGTCG ACACCATCGA CGATGTAGGT
GCGGTGCGTG CCGGCTGTGG GCCCGGCTCC CGGTTCAGCC GGGCCACGGC GGGTGTGGGG
CCCTGA
 
Protein sequence
MIPVGVLVVA KAPVPGLAKT RLAAALGADV AADIAAAALL DTLDAVADCP AAAKVVALTG 
NLDDARCADE IRSRLDNFIV IGQRGADLAE RLVHAHRDAA AATGGLPIVQ IGMDTPQVSP
ELLERCAQSL LGSDAVLGLA GDGGWWVLGV RDAGFAECLR NVPMSTPDTG AVTLAALQDT
DIHVELVCEL VDVDTIDDVG AVRAGCGPGS RFSRATAGVG P