Gene Mvan_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0297 
Symbol 
ID4643364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp331318 
End bp333873 
Gene Length2556 bp 
Protein Length851 aa 
Translation table11 
GC content69% 
IMG OID639803806 
Productnitrite reductase (NAD(P)H), large subunit 
Protein accessionYP_951152 
Protein GI120401323 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID[TIGR02374] nitrite reductase [NAD(P)H], large subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCA CTTCGCACGT CGTGGTCGTC GGCCACGGGA TGGTCGGCCA CCGGTTCGTC 
GAGGCGCTGC GCTCCCGCGA CACCGGGGAC ACATGGCGGG TCACCGTACT TGCCGAGGAA
CTCGACGCGG CCTACGACCG GGTCGGGCTG ACGGGCTACA CCGAGCACTG GGACAGGGCG
CGGCTTGCGC TGCCGGGCAA CGACTATGCC GGGGACCCGA TGGTCGACGT CCGGCTCGGG
TGCCGGGTGA CCCGCCTCGA CCCCGCATCG AAGTCGGTGA CGACCTCCGA CGGCACCCGG
ATCGACTACG ACGCGCTGGT CCTGGCGACG GGCTCCTACG CGTTCGTGCC GCCCGTTCCC
GGTCGCGACC TGCCGTGCTG CCACGTCTAC CGCACCCTCG ACGATCTCGA CGCGATCCGG
ACCGACGCCA TGTCGGCCAC CGACGGCGGA CGTGCCCCCG TCGGGGTTGT GATCGGGGGC
GGCCTGCTCG GCCTGGAGGC CGCCAACGCG CTGCGCGGGT TCGGGCTGAG CGCCCATGTC
GTGGAGAAGT CGCCGGGACT GATGGCCCAG CAGCTCGATC AGGCGGGCGC GGCCCTGCTG
GGAACGATGA TCACCGAGCT GGGCATCACC GTGCACACCG GCGTCGGTAC CGACGTCATC
GCACCTGCCC AACGCAACCG GCCCGTCCGC CGATCCGAAG AGGACGACTC GGTGCGGGTG
ACGCTCAGCG ACGGCACCAA CATCGACGCC GGGGTGGTGG TGTTCGCGGC CGGGGTGCGA
CCGCGAGACG AGCTGGCCCG CGACGCCGGG TTGGCGATCG CCGATCGTGG CGGGGTGCTC
ACCGATGTCG CTTGCGCGAC AAGCGATCCG AACATCTACG CGATCGGCGA GGTGGCCGCC
GTCGAGGGCC GCTGCTACGG CCTGGTGGGC CCGGGCTACA CCTCCGCGGA GGTGGTGGCC
GACCGGCTGC TGGGCGGCGG CGCGGAGTTC CCCGAGGCCG ACATGTCGAC CAAGCTCAAA
CTGCTCGGTG TCGACGTCGC CAGTTTCGGC GACGCGATGG GCCGCACCCC GAACTGCCTC
GAGGTGGTGG TCAACGACGC GGTCAACCAG ACGTACGCCA AGCTGGTCCT CTCCGACGAC
GCCAAGACCC TGCTCGGCGG CATCCTCGTC GGCGACGCAT CGTCCTACGG ACTGTTGCGA
CCGATGGTCG GCGAGCCGCT CCCGGGTGCC CCACTGGCGC TGATCACGCC GGCCGGAGCG
GAGGGCGGCG GCGGGCTCGG CGTCGGCGCA TTACCCGACG GTGCGCAGAT CTGCTCTTGC
AACAACGTCA CCAAGGGTGC CCTGACCGAG GCCATCGGCT CTGGTTGCTG CGACGTGCCG
GCGCTGAAGA AGTGCACGCT GGCGGGCACG TCGTGCGGAT CCTGCGTGCC GCTGCTCAAG
CAGCTACTCG AGGCCGAAGG TGTCGAGCAG TCGAAAGCGT TGTGCGAGCA CTTCTCCCAG
TCGCGCGCCG AGCTGTTCGA GCTCATCAGC GCCACCGAGG TCCGCACATT CTCCGGGCTG
ATCGAGCGGT TCGGATCCGG AAAGGGTTGC GACATATGCA AACCCGTGGT GGCGTCGATC
CTCGCGTCGA CCAGCTCGAC GCACATCCTC GACGGCGAAC AGGCCTCGCT GCAGGACACC
AACGACCACT TCCTGGCCAA CATCCAGCGC AACGGCAGCT ACTCCGTGGT GCCCCGGGTG
CCGGGCGGTG ACATCACCCC CGAGCAGCTG ATCCTGATCG GCGAGATCGC CAGGGATTTC
GGCCTGTACA CCAAGATCAC CGGCGGGCAG CGCATCGACA TGTTCGGGGC GCGCGTCGAG
CAACTGCCCG AGATCTGGCG CAGGCTCGTC GAGGGCGGCA TGGAGTCCGG CCACGCCTAC
GGCAAATCGC TGCGCACCGT GAAGAGCTGC GTGGGCAGCG ACTGGTGCCG ATACGGCCAA
CAGGATTCGG TGCAGATGGC GATCAACCTG GAGTTGCGCT ACCGCGGGCT GCGTGCCCCG
CACAAGATCA AGATGGGAGT GTCGGGCTGC GCACGGGAGT GCGCGGAGGC CCGCGGCAAG
GATGTCGGCG TCATCGCCAC CGAGACCGGC TGGAACCTGT ATGTCGGCGG CAACGGCGGG
ATGACCCCGC GGCACGCCGA ACTGCTCGCC GGCGACCTCG ACGACGAGAC ACTCATCCGC
TACATCGACC GGTTCCTGAT GTTCTACATC CGCACCGCGG ATCGCCTGCA GCGCACCGCA
CCCTGGGTGG AGCAGGTCGG CCTGGAACAC CTGCGCGAGG TCGTCTGCGA GGACTCGCTG
GGGCTGGCCG AGGAGTTCGA GGCCGCGATC GCCCGCCACG TCGAGGGCTA CGCCTGCGAG
TGGAAGGGCG TGCTCTCCGA TCCCGACAAG CTGTCGCGGT TCGTATCGTT CGTCAATGCC
CCCGACGTGC CCGACCCGAC CGTCACGTTC ACCGAGAACG CCGGCCGGAT GGTGCCCGCA
CCGGTTTCCA TCGGTATGCC CAAGATAGGA AGGTAG
 
Protein sequence
MSSTSHVVVV GHGMVGHRFV EALRSRDTGD TWRVTVLAEE LDAAYDRVGL TGYTEHWDRA 
RLALPGNDYA GDPMVDVRLG CRVTRLDPAS KSVTTSDGTR IDYDALVLAT GSYAFVPPVP
GRDLPCCHVY RTLDDLDAIR TDAMSATDGG RAPVGVVIGG GLLGLEAANA LRGFGLSAHV
VEKSPGLMAQ QLDQAGAALL GTMITELGIT VHTGVGTDVI APAQRNRPVR RSEEDDSVRV
TLSDGTNIDA GVVVFAAGVR PRDELARDAG LAIADRGGVL TDVACATSDP NIYAIGEVAA
VEGRCYGLVG PGYTSAEVVA DRLLGGGAEF PEADMSTKLK LLGVDVASFG DAMGRTPNCL
EVVVNDAVNQ TYAKLVLSDD AKTLLGGILV GDASSYGLLR PMVGEPLPGA PLALITPAGA
EGGGGLGVGA LPDGAQICSC NNVTKGALTE AIGSGCCDVP ALKKCTLAGT SCGSCVPLLK
QLLEAEGVEQ SKALCEHFSQ SRAELFELIS ATEVRTFSGL IERFGSGKGC DICKPVVASI
LASTSSTHIL DGEQASLQDT NDHFLANIQR NGSYSVVPRV PGGDITPEQL ILIGEIARDF
GLYTKITGGQ RIDMFGARVE QLPEIWRRLV EGGMESGHAY GKSLRTVKSC VGSDWCRYGQ
QDSVQMAINL ELRYRGLRAP HKIKMGVSGC ARECAEARGK DVGVIATETG WNLYVGGNGG
MTPRHAELLA GDLDDETLIR YIDRFLMFYI RTADRLQRTA PWVEQVGLEH LREVVCEDSL
GLAEEFEAAI ARHVEGYACE WKGVLSDPDK LSRFVSFVNA PDVPDPTVTF TENAGRMVPA
PVSIGMPKIG R