Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0122 |
Symbol | |
ID | 4648054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 136098 |
End bp | 137135 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639803633 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_950979 |
Protein GI | 120401150 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.592711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA AAGCCCTTCT CGTGGTTCTC GTCTCGGCCG TGCTGGCCCT GGCGGGCTGC TCGGTGGACA ACGGAGGGCA GCACGGCGAC GACTCAGGCA AGCCGACCAT CCGGATCGGC TACCAGACGT TCCCGAGCGG CGACCTGATC GTCAAGAACA ACAAGTGGCT CGAAGAAGCG TTGCCCGACT ACAACATCAA GTGGACGAAG TTCGACTCGG GCGCCGACGT GAACACGGCC TTCGTGGCAG GAGAACTCGA CTTCGGTGCG CTGGGCTCCA GCCCCGTCGC GCGCGGCCTG TCCGAGCCGC TGAACATCCC GTACAAGGTC GCGTTCGTGC TCGACGTCGC CGGCGACAAC GAGGCCCTGG TGGTGCGTAA CGGGGCAGGC GTCGACACCA TCGCGCAACT GAAGGGCAGG CGTATCGGCA CCCCGTTCGC GTCCACCGCG CACTACAGCC TGCTGGCCGC GCTCGACCAG AATGGCTTGT CGGCCAACGA TGTTCAGCTA ATCGACCTGC AACCGCAGGC CATCCTCGCG GCCTGGGAGC GCGGGGACAT CGACGCCGCC TACACCTGGC TGCCGACCCT GGACGAGCTG CGCAAGACCG GCCGGGATCT GATCACCAGT CGTCAGCTCG CCGATGCCGG CAAGCCCACG CTCGATCTGG CGACCGTCAG CGACGAGTTC GCGTCCGCCC ACCCCGAGGC CGTCGATGTG TGGCGGCAGC AGCAGGGACG CGCGCTTGAC CTCATCCGGG AGGATCCGCA GGCTGCCGCC GAAGCCATCG CCGCCGAGAT CGGCCTGACC CCGCAGGATG TGGCCGGTCA ACTCAAGCAG ATGGTGTTCC TCACCCCGCA GGACATCTCA TCCACGGAAT GGCTTGGCAC TGAGGGTAAT CCAGGCAACC TCGCGGTGAA CCTGGAATCC GCTTCGCAGT TCCTGGCCGA TCAGTCGCAG ATCCCGGCCG CGGCGCCGTT GAAGACGTTC CAGGACGCCG TCTACACGAA AGGCCTACCG GGTGCCCTCA ACGAATGA
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Protein sequence | MKLKALLVVL VSAVLALAGC SVDNGGQHGD DSGKPTIRIG YQTFPSGDLI VKNNKWLEEA LPDYNIKWTK FDSGADVNTA FVAGELDFGA LGSSPVARGL SEPLNIPYKV AFVLDVAGDN EALVVRNGAG VDTIAQLKGR RIGTPFASTA HYSLLAALDQ NGLSANDVQL IDLQPQAILA AWERGDIDAA YTWLPTLDEL RKTGRDLITS RQLADAGKPT LDLATVSDEF ASAHPEAVDV WRQQQGRALD LIREDPQAAA EAIAAEIGLT PQDVAGQLKQ MVFLTPQDIS STEWLGTEGN PGNLAVNLES ASQFLADQSQ IPAAAPLKTF QDAVYTKGLP GALNE
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