Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_0102 |
Symbol | |
ID | 4644985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 115955 |
End bp | 116521 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639803613 |
Product | TetR family transcriptional regulator |
Protein accession | YP_950959 |
Protein GI | 120401130 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.508709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.486637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCTG TGGCATCGCG AGAGTCGTTC TTCAAGACGG GCCTCGACGT GCTGGCCGAC CTGGGCTACG GAGGCCTGAA ACTCGCCGAG GTGTGTGACC GCCTCGGCGT CACCACCGGG TCCTTCTATC ACTACTTTCC GAACTGGCCG GCGTACTCCC AGGAGCTGGT TGGGCACTGG TATGAGGGGA TGACCCTCAA GGTCGTCGAC ACCGTGCAGG CCGAGACCGA TCCGCGGCTG CGCATCGATC GCCTGATCGA GGCCGGACTC ACGCTGCCGC ACAGCGCCGA GGCCGCAATC CGGGTGTGGA GTGGCGTCGA CCCTCATGTG GGCTCGGTCC AGGAGGCCGT GGATCGCCAA CGCTTCGACG TCATGCGCGA ATCCGCGCTG GAGGTACTGC GCAATCCGCG CCAAGCCGAG CTGTTCGCCG CCTGGGCGGT TTATCTTCTG GTCGGGTACG AGCAGGCCAG TTTGCCTGCG GACGTCGACG GCTTGCGGTG GATTGTCGGT CAGTTGCTCG AGGCGCTCGA CTCGGGCCGG TTCACGTCGG TGCCCGGCCG TGAGTGA
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Protein sequence | MGAVASRESF FKTGLDVLAD LGYGGLKLAE VCDRLGVTTG SFYHYFPNWP AYSQELVGHW YEGMTLKVVD TVQAETDPRL RIDRLIEAGL TLPHSAEAAI RVWSGVDPHV GSVQEAVDRQ RFDVMRESAL EVLRNPRQAE LFAAWAVYLL VGYEQASLPA DVDGLRWIVG QLLEALDSGR FTSVPGRE
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