Gene Mvan_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0088 
Symbol 
ID4644971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp99755 
End bp101167 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID639803599 
Producthypothetical protein 
Protein accessionYP_950945 
Protein GI120401116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.210436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.176118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGCG TGACGATCTC GGTAGTGCGC TCATCCAACC CAGTAGGCCT TGCAGAGGCT 
TCGGAATCGA TGCAACGGAC GATCCGCGCG CTGGACGACC TCATTGAGAG CCGGCAGCGG
ACTCTGGACC AACTCAGTCT GGTCTGGTCC GGCGCAGCGA GCGACACCGC GATCAGGCGC
GGACGCCGCT TGTTGCGGGA GAAGAACAAC TTCCGCGACC GTCTTCACGC TATCCAGACG
ACATTGTTCA GGGGTGGCAG CCAACTGTCA GCTCTCCGTG AAGAGATCCT GTCGACGACA
AGTCAAGCAA CCACGCTGGG CGGAATCGTC GGCGACGACG GCTCGGTTCA ACCGACGTCG
GTGGCGCACA TGCTCACGCC GACCATCGCC ACGGCTTACT CGACCGTATT GCGCAAGCTG
CTCCACACAT TCGAGGCTGT CGACGAGGCC ACGGCATCCG GCCTACGAGG CGGGCGTCCT
GGTACCGGCG AGTCCATCTA TCAAGCAGTC GACTTCGTCG TTGGCGGTGG CGCACCAGAG
GCTCCACCTG ATCAGGATCC CGCTGCCACT ACGAGGCGAC AGAATGAGAT CAACGCGTTC
AAGCAAGTAT TCGGACGCCA CCCGGAGTCA CCGACGGACT GGAAGACAGC GGCCGCCCTT
GATCCGCACA GCTACGACGA TAAGTACAAC GACGAGCCGC CGAGCGTCGT CGTAGGGCGC
ATCGAGCCCG TACCCGGGCA AGGAATCGTC AAGTCGGGAC TCTTCATTCC GCGGGATGTC
GTCTTCAACG TGCCACGCGA CGATCTCGGT GACAACCGCG GGTTCGATCC CAATTCTGGT
CCGGAGGAAA CCCGCGTCAG CATTTACGTC GACTACGAAA ACGGTCTGGT GATCGCGCGA
CAGAACCCGT CAGTGGATAC CGCTGGCAAT GTCCGCGTGC TGACACCTGA TATCAAGGTG
CAACAGGCAC CAGGCGGGGC GGTGCGAATC CAGTACGAGG CGGCTAACGG TTTCGCGCCC
CCCGGTGCCG AGCTTTCGGG TCATGTGGTT CGCGGTGACA TCGTCGTTAC GCCGGGGGCG
GGTAGCGCGG CCGCAAGCGT CGATGGCGTC ATCGGCGACT ACCCGTCGTT GGAGGTCTAC
CAGGACTTGC CAACCGGCCA AACCTACACG CTCGCCCAAG ACGCCGCGGA CAGTGGCAAT
GTGTACGGCC CGCTGACAGA GCTGCCGTTC TCGCACGAAA TTGGCGAGGG CACAGCGGCT
TTCGCACCTT TCGAATCCCT TACTCCGCAA CTTCCCGGCG GACCGCGCTA TCCAGGCGAC
GCTATGCCTT ACGTTCCCGG GCGCGTTGAT CCGAATACGC CGACCGAACT CGCACCGGCT
GACAAAATCC CCAACGTCGT CGTGGTCAGG TAG
 
Protein sequence
MGGVTISVVR SSNPVGLAEA SESMQRTIRA LDDLIESRQR TLDQLSLVWS GAASDTAIRR 
GRRLLREKNN FRDRLHAIQT TLFRGGSQLS ALREEILSTT SQATTLGGIV GDDGSVQPTS
VAHMLTPTIA TAYSTVLRKL LHTFEAVDEA TASGLRGGRP GTGESIYQAV DFVVGGGAPE
APPDQDPAAT TRRQNEINAF KQVFGRHPES PTDWKTAAAL DPHSYDDKYN DEPPSVVVGR
IEPVPGQGIV KSGLFIPRDV VFNVPRDDLG DNRGFDPNSG PEETRVSIYV DYENGLVIAR
QNPSVDTAGN VRVLTPDIKV QQAPGGAVRI QYEAANGFAP PGAELSGHVV RGDIVVTPGA
GSAAASVDGV IGDYPSLEVY QDLPTGQTYT LAQDAADSGN VYGPLTELPF SHEIGEGTAA
FAPFESLTPQ LPGGPRYPGD AMPYVPGRVD PNTPTELAPA DKIPNVVVVR