Gene Mvan_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0056 
Symbol 
ID4644910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp69075 
End bp69773 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID639803567 
ProductUbiC transcription regulator-associated domain-containing protein 
Protein accessionYP_950913 
Protein GI120401084 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.210738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC CCAAGCCGTA TCTGGTGCGT ACGGGGCTCG ACGGCATCCT CGACGGACTA 
CAGGAAGGGG ACCCGTTTCC CCCCGAACGT GAACTGGCGG CGCGGTTCGG GGTGGCCCGC
GAGACCGTGC GCCAGGCGCT GCACGAACTG CTGGTCGAGG GCAGAATCGA ACGGCGCGGG
CGGGGCACCG TGGTGTCACG GCCCAAACTC GTCCAGCCGC TTTCGCTGAG GTCCTACACC
GAGGGTGCCC AACGTATGGG ACGCACGCCC GGCCGACTCC TGGTGACGTG GGAGAACATC
ACCGTCGACG CGGAAATCGC GGCCGCACTG GATGTTTCAC CCTCGGCGCG AGTGATGCAC
CTGGAGCGGG TGCTACTCGC CGACGACGTG CGGATCGGCT TGGAGAGCAC CTACCTTCCG
CGGCACCGAT TCGGCGATCT CGAACAGCAC TTCGATCCGA CGACCTCGTT GTACTCGGCG
ATCCGGGCGC GCGGTGTGAA GTTCGGCTCG GCGACCGAGC GGATCGAGAC GGTGCTACCG
TCGCCGCGCG AGGCCGAGCT GCTGGAGTCG ACGACCGCGA TGCCGATGTT GCTGCTCAAC
CGGCGATCCG TCGACGTCGA CGGGGTGCCG ATCGAGGTGG TGCGCGCGCT CTACCGAGGT
GACCGGGTGG CGTTCGAGGC CACCCTCGAC GACCGCTGA
 
Protein sequence
MNVPKPYLVR TGLDGILDGL QEGDPFPPER ELAARFGVAR ETVRQALHEL LVEGRIERRG 
RGTVVSRPKL VQPLSLRSYT EGAQRMGRTP GRLLVTWENI TVDAEIAAAL DVSPSARVMH
LERVLLADDV RIGLESTYLP RHRFGDLEQH FDPTTSLYSA IRARGVKFGS ATERIETVLP
SPREAELLES TTAMPMLLLN RRSVDVDGVP IEVVRALYRG DRVAFEATLD DR