Gene Mvan_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0038 
Symbol 
ID4644892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp49139 
End bp49930 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID639803549 
Productexcinuclease ABC subunit C 
Protein accessionYP_950895 
Protein GI120401066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.892713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGAC ACAGCTTCAA CACCGGCGAA GCTTTGGGAC TCAGAGGCCC CGAAGATCTG 
ACTGAGGACA AGGTCCGGGA ATACACACGA TTCCAAGGCA TCTCACCCCG GCAGTTTCCC
GCGAACCCTG AGCGACACTG GGTGGTGCTG GTCGCCGACG GAAGGCGGCG CTCCCGGTTG
TGGGGAACGT TCGAGAATCA CGGCGAGATC GTCGCAGAGC GCACGGCGGA GGCCCGATTC
TTTGATCTGC GTCGCAGCGA CATTCTGAAA CCACTTGTAA ACCGGCTCGT CGTCGAGTGG
GACACTCCGC GGGTCTGGCA CCGACGGGCA GCAAGCGCAG CAGACATGCC CGTTCTCGAG
ATCGCCGACC GCGACAAGGT TCCGTTTCCG GGGTTCGACA ATGTGCTACT TACCTTTCAC
GACCTCGGTG AGATGCTGTC AGACCCACGG TATCGCGACT GGCAGGTGGC GCTGTCGCAG
GTGCAAGGCA TCTACCTGAT CACCGACTCG TCCAACGGCA AACAGTATGT CGGGAAAGCC
GATGGCGCGG AACGCATTCT GCAGCGCTGG AAGTCCTATG CGCAGGACGG TCACGGCGGC
AACCGCGCCC TGCGAGACCT CGCCAAGATC AGCATCGGTC TCGGCAGCGG CAAGACCGAC
CACGCGCGCC ACTTCCTGTT CAGCATCCTG CGGGTGTTCG GACCAAGCAC GTCGTCATCG
GAAGTCGACA AAGCCGAATC TCACTACAAG GACGCTATGA TGACCCGCAA GTTCGGCCTC
AATCGCAACT GA
 
Protein sequence
MIRHSFNTGE ALGLRGPEDL TEDKVREYTR FQGISPRQFP ANPERHWVVL VADGRRRSRL 
WGTFENHGEI VAERTAEARF FDLRRSDILK PLVNRLVVEW DTPRVWHRRA ASAADMPVLE
IADRDKVPFP GFDNVLLTFH DLGEMLSDPR YRDWQVALSQ VQGIYLITDS SNGKQYVGKA
DGAERILQRW KSYAQDGHGG NRALRDLAKI SIGLGSGKTD HARHFLFSIL RVFGPSTSSS
EVDKAESHYK DAMMTRKFGL NRN