| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_0003 |
|---|
| Symbol | |
|---|
| ID | 4643460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3537 |
|---|
| End bp | 4430 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639803511 |
|---|
| Product | 6-phosphogluconate dehydrogenase-like protein |
|---|
| Protein accession | YP_950860 |
|---|
| Protein GI | 120401031 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.149953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.17244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTGG GTCTGATCGG TCTCGGCAAG ATGGGTTTCA ACATGCGTGC CCGGCTGCGC
GACGGTGGTC ACGACGTGGT GGGGTTCGAT CCGAGACCCG AGGTCTCGGA CGTGGCCTCG
CTCGCGGATC TCGCGGCGCG GCTGAGCGCT CCCCGCGTGG TGTGGGTGAT GGTGCCGTCC
GGGACCGTGA CCGACAGCAC GATCTCCGAG TTGGCCGGTG TGCTCAGCCC GGGCGATCTG
GTTATCGACG GCGGCAACTC CCGCTACACC GAAGACGGCA GGCACGCGAA TCTGTTGGCG
GAGAAGGGAA TCGCGTTCAT CGATGCCGGT GTTTCGGGTG GCATCTGGGG GCTGACGGAA
GGTTACGGGC TGATGGTCGG CGGCAGTGAC GCCGACGTGG CGCGCGCGAT GCCGATCTTC
GAGACGCTGC GCCCACCAGG ACCTCTCGAG GACGGATTCG TCCACGTCGG GCCGGTCGGA
GCCGGACATT TCGCCAAGAT GGTGCACAAC GGCATCGAAT ATGCGCTGAT GACCGCCTAC
GCCGAGGGCT ACGAGATGTT GGCCGCCGAA GACCTGGTGA AAGACCCCCA AGCGGTGTAC
CAGGCCTGGA CCAACGGGAC GGTGGTGCGG TCCTGGCTGC AGCAGCTGTT GGCGAAGGCT
CTCAAGGAAG ATCCGAGCTT GTCCGATATC AGCGGCTACA CGGAGGATTC CGGTGAAGGG
CGGTGGACCG TCGAAGAGGC GATCCGGTTA CGGGTCCCGG TGCCGGGCAT CGCGGCCTCG
CTGTTCGCGC GCTTCCTGTC CCGGCAGGAC GAGTCTCCGA CGATGAAAGC TGTTGCGGCT
CTTCGTAATC AATTCGGCGG CCACGCCGTC AAGCGGGTTA GTGAATCAGG CTGA
|
|---|
| Protein sequence | MQLGLIGLGK MGFNMRARLR DGGHDVVGFD PRPEVSDVAS LADLAARLSA PRVVWVMVPS
GTVTDSTISE LAGVLSPGDL VIDGGNSRYT EDGRHANLLA EKGIAFIDAG VSGGIWGLTE
GYGLMVGGSD ADVARAMPIF ETLRPPGPLE DGFVHVGPVG AGHFAKMVHN GIEYALMTAY
AEGYEMLAAE DLVKDPQAVY QAWTNGTVVR SWLQQLLAKA LKEDPSLSDI SGYTEDSGEG
RWTVEEAIRL RVPVPGIAAS LFARFLSRQD ESPTMKAVAA LRNQFGGHAV KRVSESG
|
|---|
| |