Gene Mthe_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1597 
Symbol 
ID4462029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1728270 
End bp1729499 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content44% 
IMG OID639700616 
Productperiplasmic binding protein 
Protein accessionYP_844005 
Protein GI116754887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.465677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTAA CTGTTCTGTT ACTATTTATG ATCCTTGTTG CAACGCCAGG AGCTGCATCC 
AGCTACACGC TGAAGGTCTT TGGCAATGCC AACATGGATG ACACAATTGA TGAGTCCGAT
ATTGCATATA CTCGGGGAAT TATTGACGGA AAAGAGAAAA ACACCGAATT TGCCGATGCC
AATTACGATG GCAAGGTGGA TTCCAGGGAT ATAGAGCAGA TACAACATAT CATACAAGGT
GATGAATCGA TCTTAACTCT TATCGATACT GCTAACAGAA CTGTGACTCT GGAGATGCCT
ATTAACAGGA TCGTGGCTCT GACTGATGAC TCTGCAGAGG CTCTTAGGAT TTTACATTCT
ATAGATAAGG TAGTGGGTGT ATCGATTGAG ACGCTGGAGA ACACAGCCTA CCTTCCTGAG
TTCAGTCAGA TGCCTAATGT CGGAAAGTGG AACGAACCAG ATATCGAGAA GATCCTTTTA
CTAGAACCAG ATCTGGTTAT AAGCTACAAG TCGGCTACGT CGAAGTATCT TGAACCAATG
CTCAATGGTA CAGGCATTTC CATTGTGGCG CTTGATCTCT ACAGAGCCAA TGATCTGCCA
GCAGAGATGA AAATGCTCGG ATATATAGTT AATAGAACGG CTGAGGCAGA TAACTATCTA
GAATGGTTTA ATCGGGTTAC AGATACGGTC GATGAGAAGA TCTCAGAGAT ACCAGAGAAT
AAAAGAACAC GTGTCTACCT AGAAGGTGCC TCTGATCTTA AGACATATAC CAAGGGGAGA
GGGGCTGATT TGGTCTGTAC CATGGCCGGT GGTGTGAATA TCGCTTCTAA TCTAACAGGT
CTTTACCCAG ACGTGGAGTC TGAGTGGGTG ATAGTACAAA ATCCGGATGT TATTGTAAGA
TTTACACAAC CCTCTGAGAT CGCATGCGGC TATGCGACGA ACGATCCTTC TGGATTTGAG
GCTAAAAGGA GGGAGATACT GTCCAGAACT GGCTGGGGCA ATATTACCGC TGTAAAAGAA
GGGCGCGTCT ACCTGCTGCT CTATGAGTTT GGAGCGAGCC CTGGAGTTCC TGTGGCAATT
GCCTATATGG CAAAATGGTT CTATCCAGAG TTATTCGAAG ATTTAGATCC ACAAACTGTA
CATAAGGAAT ATCTAGAGCT TCAGGGATTC GATTACGACC TGAAGAATCA TGGAGTTTTT
GTTTATCCAC TGCATGGAGG AAGTAGATAA
 
Protein sequence
MRLTVLLLFM ILVATPGAAS SYTLKVFGNA NMDDTIDESD IAYTRGIIDG KEKNTEFADA 
NYDGKVDSRD IEQIQHIIQG DESILTLIDT ANRTVTLEMP INRIVALTDD SAEALRILHS
IDKVVGVSIE TLENTAYLPE FSQMPNVGKW NEPDIEKILL LEPDLVISYK SATSKYLEPM
LNGTGISIVA LDLYRANDLP AEMKMLGYIV NRTAEADNYL EWFNRVTDTV DEKISEIPEN
KRTRVYLEGA SDLKTYTKGR GADLVCTMAG GVNIASNLTG LYPDVESEWV IVQNPDVIVR
FTQPSEIACG YATNDPSGFE AKRREILSRT GWGNITAVKE GRVYLLLYEF GASPGVPVAI
AYMAKWFYPE LFEDLDPQTV HKEYLELQGF DYDLKNHGVF VYPLHGGSR