Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1484 |
Symbol | |
ID | 4461938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 1599405 |
End bp | 1602590 |
Gene Length | 3186 bp |
Protein Length | 1061 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639700503 |
Product | SMC domain-containing protein |
Protein accession | YP_843897 |
Protein GI | 116754779 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0728646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTCA ATAGGCTGGT GTTGCGGAAC TTCAAGAAGT ACAGGCGTGC AGATATAACA TTCCAGGACG GGCTCACTGG CATAATAGGC GGGAATGGAG CAGGCAAGAG CACGATCGTC GAGGCGATAG CCTGGGCGCT GTATGGCAGC AGGGCATACA CTGTCGAGAA GCTCGAGAAG AGGCTCATAA AGAACGTGAA CGCCAGGCCC GAGGAGTCGG TGGAGGTTCA TCTGACGCTC TCCATTGGAA AGAATGAGAT CGTCATATCG AGAATCATGA AGGGGAAGAG CATGCTGCCC GATGCATCTC TGTGCATCAA CGGCCAAGAG GTCGCAAAGG GCATGCGCGA GGTCGATGCT CATCTCTCTA AACTGATGAA GATAAGCTTC CAGGACTTCA TGAGGACATT CTATGCGCGA CAGAAGGACC TTGATAATCT CATAAGAGAG GGTGGAGCTG GAAAGAGGGA TTACCTGCTG AAGCTCCTCG GCCTTGAGGA CATCCGTGAG ATCGGGCTCG AGATCACGAA GGATGATCTG AGAGAGATCG AGAGAAGGAT CAATCTGGCC TCCGGAGCGC TCTCGGAGCT GGGCGATGTG GAGAGGAGGA TCGAGGAGAT AAGAGCGCAG GAGGCATCTG CCAGGGCAGA GCTGATCAAA CGGGAGATTG CTCTCAAAGA CGCTGAAAAT GAGCGGAAGA GGGCTAGGGA GGATCTGGAG CGGCTGGACG AGAAGAGACA GGAGCATATG CGTCTGAAGC GGGAGATCGA GCACGTTCAG GGCTACATCG CAGATAGGGA GAGGACTGCA AGAGAGGAGC GCGCAAGGCT CGAGGGGATT GAGGAGAAGA AGAGAAAGCT CCATGCTCTC ACATCAGATC TGAAGCGCCT GAATGAGATA AGAAAGCACC TCCATGACCT GGAGGCGGCT CGGAGAGATT ACGAGCAACT GAACTCAATT CTTAAGAGCC TTCAAATAGA GAGAAGGGAG GCGCTTCGCT CACTGAATGA GCTTGAGACA AGGCTTGATG AGCTCTACAG ATGCCGCAGT GAGATGGAGG GGCTCAGGGA GAAGGCGGAT CTCTATGTGA CTACACAGAG GGAGCTGGAG GAGCTCGAGA TAAAGAGAGA GCGGTTCACC TCCCACGTCT CATCTATCGC TAGCCTGGAT GCAGAGAGGT CCGCGCTTTT GAGAGATTAC AAGATGAAGG CTGACCTTGT GAGAGAGCTT CGGGAGGCCA GGAGATCGCT TCCAGATCTC GAGCGCCGGC TGTCTGTCCT GGAATCGCTG AAGAGGGAGC TGGAGGAGCT TGAAAGGGCA AAAGAGATGC ATCGCAGGCT TGATGAGCTG TTATCTGAGA GAGACTCACG CATCGAGAGG AGAGCTCAGC TTCTGAATCG GCTTGATATT ATTCACAAAA AGCTCTCTGA GATCGGCGAT CTTGCCCGGG AGGAGAGGGG TCTCAGAGAG AGGGAGGTCC AGCTGGAGAC GCTCATAGAG ACTCTGAATC AAAAGAGGAC AGAGATCGAG AGCCGGCGCA ATCTCGCAAG ATCCAAGATG CACGAGTCTC AGAGCAACCT CAAACGAATC GAGAGCCTCG GGGCCGAGAG CCCCTGCCCG ACGTGCGAGC GCCCACTTGG CGACCAGTAC TCTCGACTTA CGGAGAAGTA CAGGGAAGAG ATCAGAAGGT ACAGAGACGA TTACGAGACT GCTACAAATG AGCTCCGCGA TTTGAATGAG CGCGTCAAAA ATGCGCAGCA TCTCAGGGAG CGTCTCAGGG CATCCGCAGA ATCGCTGGGC AAGAGGAGGA GCGATCTCGC ATCGCTTGAG GCTGAGCAGA GGGAGGTCAT GCTCCAGCTC TCAGAGATGA GGGAAAGAAT CTCCGAGCTG GATGGGGAGA TCGATGCCAT AGGCCAGGCT GAGTATGATT CGAAGAGACA CGAAGAGGTC AAGCGCTCGC TTTCAGGTTA CAATGAGCTC ATCGATAAGC GGGCGAGGCT CCTGGCACGC CTCGAAAACC TCCCCGGGCT GGAGAGCGAG CTGGAGAATA CCAGAGAAAA AGCATCCGCG CTGGATGAGA GAATATTCGA GCACTCGAGA AGCATCTCCA TCTTAGATTA CGATGAGCGT GCATACCTGA GGGCGAGATC GACTCTCTCA GAGCTCCAGA GCTCCCACGA GAGGTACGGG CTCCTCCTCC AGCAGACAGG CGAGATTGAA AGGCTTGAGA AGCTGCTGGA AGCCCTGAGA ATACGGGTCC AGAGGCTGGA CGGAGATATG CTGAAGGTGG AGGGGGAGCT GTCAGAGCTG GCATTCGATC CGAATGAGTA TGATATGCTC AGAGCAGAAG AAACAAGGCT TGCTGAGATC GAATCGATCG CGAACCGCCT CAGGGTCGAG ATCGCAGCTG AGGATCTCTC GAGATCAAGA CTGTTCGAGG CCGAAACGGA TCTCAGAAGG CTGCACACGC AGATGGCTGA GCTCAGTACG CGTCTTGAGG AGCTGGGTTA TACCGATGCA TCTTATGAGA ATGCGAAGAG AATACTATCA GATGCGGATG AGAGGCTGAG GTGTGCGAAC GAGGAATACG CCAAAATGCG CGATGAGCTC AGGAGGCTGG AGTGGTCCCT ATCTGGCCTG AATGATGATC TGAAGAGAAA AAGGGAGCTG GAGAGGAAGA TCGATGAGCT AAACAGAAAA GCACAGGTGG TATCCGTAGT CAGGGACCTG CTGGTGCGGT TCATGGACGC GCTCCTGGTG AGGGTGAGAA ATGAGATCGC CCAGAACGCG GCAAGGATAA TGGAGGAGGT CACCGGCAAG TACAGCATAC TCAAGATAGA TGAGAACTTC AACATACTGG TCGATGACAG GGGCACGGAT TATCCGATAT GGAGGTTTTC AGGCGGAGAG ATAGATATGA TCGCCCTCTC TGTGAGAATA GCGATAAGCG AGTATCTCAT GAGGTCTTTC GGGGAAGAGA GCGGCTACTC CTTCATGATA CTCGATGAGG TCTTCGGATC GCAGGATATC GAGCACAGGG AGAGGATGAT AAACATGCTC AGGAGTCTAG GCGTGAGATT CCCACAGCTG TTTGCGATAA GCCACATCAG CGATGTCCAG GGTCAGTTCG ACAACACGAT AGTGGTGAGC GAGGATGATA TGGGAAACAG CGTTGCATAT CAGTGA
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Protein sequence | MHLNRLVLRN FKKYRRADIT FQDGLTGIIG GNGAGKSTIV EAIAWALYGS RAYTVEKLEK RLIKNVNARP EESVEVHLTL SIGKNEIVIS RIMKGKSMLP DASLCINGQE VAKGMREVDA HLSKLMKISF QDFMRTFYAR QKDLDNLIRE GGAGKRDYLL KLLGLEDIRE IGLEITKDDL REIERRINLA SGALSELGDV ERRIEEIRAQ EASARAELIK REIALKDAEN ERKRAREDLE RLDEKRQEHM RLKREIEHVQ GYIADRERTA REERARLEGI EEKKRKLHAL TSDLKRLNEI RKHLHDLEAA RRDYEQLNSI LKSLQIERRE ALRSLNELET RLDELYRCRS EMEGLREKAD LYVTTQRELE ELEIKRERFT SHVSSIASLD AERSALLRDY KMKADLVREL REARRSLPDL ERRLSVLESL KRELEELERA KEMHRRLDEL LSERDSRIER RAQLLNRLDI IHKKLSEIGD LAREERGLRE REVQLETLIE TLNQKRTEIE SRRNLARSKM HESQSNLKRI ESLGAESPCP TCERPLGDQY SRLTEKYREE IRRYRDDYET ATNELRDLNE RVKNAQHLRE RLRASAESLG KRRSDLASLE AEQREVMLQL SEMRERISEL DGEIDAIGQA EYDSKRHEEV KRSLSGYNEL IDKRARLLAR LENLPGLESE LENTREKASA LDERIFEHSR SISILDYDER AYLRARSTLS ELQSSHERYG LLLQQTGEIE RLEKLLEALR IRVQRLDGDM LKVEGELSEL AFDPNEYDML RAEETRLAEI ESIANRLRVE IAAEDLSRSR LFEAETDLRR LHTQMAELST RLEELGYTDA SYENAKRILS DADERLRCAN EEYAKMRDEL RRLEWSLSGL NDDLKRKREL ERKIDELNRK AQVVSVVRDL LVRFMDALLV RVRNEIAQNA ARIMEEVTGK YSILKIDENF NILVDDRGTD YPIWRFSGGE IDMIALSVRI AISEYLMRSF GEESGYSFMI LDEVFGSQDI EHRERMINML RSLGVRFPQL FAISHISDVQ GQFDNTIVVS EDDMGNSVAY Q
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