| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1401 |
|---|
| Symbol | |
|---|
| ID | 4463024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1501574 |
|---|
| End bp | 1502785 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639700419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_843816 |
|---|
| Protein GI | 116754698 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGACTTA GATCCTGCCT GAAGAGGTAC AAGAAGGACA CACATCGTGC TCTGCCTCCG
GAGGAGACGC TCGAGATAGT AGAAAAGAAG ATGCCTGCAG CTGGAATAAC AAGAGTCGCG
GACATAACCA ACCTCGACCG GATAGGCATA CCGGTCTTCA CTTCCATAAG ACCAACAGCG
GAGAAGGGTG CGATATCTGT TTACAATGGA AAGGGCGCGA CTCCAACCGA GGCGAAGGTC
TCCGCCATAA TGGAGGGCAT CGAGAGGTAC TCTGCCGAGG TTCGGAATGC CGATCTCAGA
ACTGCCAGGT TCTCCGAGCT CAGGGAGAAC GCGCTGAATC CGGCGGAGCT CATACTGCCG
AGAGATGCCG ATCCAGATGC GGTGATTCCG TGGGTGACAG GATATGATCT CATGGGGGAT
GAGGAGATCC TGGTTCCGGC GAATGCTGTA TTCCATCCGC TGCCCTCGAG CTACACGCGT
CTGTTCAGGA CAAACACCAC AGGTCTCGCA TCTGGGAACC AGCTGGAGGA GGCGATCTTC
CATGGGCTCG CAGAGGTCGT TGAGAGGGAT GCGTGGTCGA TAGCAGAGCA CGCCAGGAGT
ATGGGGCCGC TGCTCCGATA CAACGGCGAT GGCCTTGCAG GGGAGCTTCT TGAAATGTTC
CAGCGCGCAG AGGTCCAGGT TTACGTGAGG GACATAACGA GCGATGTGGG TGTTCCAACA
TTCGCCGCGG TCTCGGATGA TGTGAAGTTG AAGGATCCCG CGCTTCTGAC AGCTGGAATG
GGAACGCATA CCGATCCGGA GGTGGCGCTG CTGAGAGCGC TCACAGAGGT CGCACAGAGC
CGTCTCACGC AGATACACGG CGCCCGGGAG GATACTGTGA GCGCCGAATT CAGGCGCATG
ATGGGTTATG ACAGGCTGAA GCGCCTGAAC AGGCACTGGT TTGAGTACGA ACGCGAGGAG
GATTTCAGCT CCTTAAACTC TTACAATACC GATGATTTTC TTGATGACAT AAGATACATG
CTCGATCGGC TTCAGACCGC AGGATTTGAG AGGGCGATAG TTGTGGACCT CACGGCTTCT
GAGATAATGG TGCCAGTGGT CAGGGTGATA GTGCCCGGGC TGGAGATATC GGCTGTGGAT
CCGGAGAGGG TCGGCAAGCG GTGCAGGGAT GCCAAGAATC GTCGTGTTTC TGGGCCCAAG
CATGCCTCAT GA
|
|---|
| Protein sequence | MRLRSCLKRY KKDTHRALPP EETLEIVEKK MPAAGITRVA DITNLDRIGI PVFTSIRPTA
EKGAISVYNG KGATPTEAKV SAIMEGIERY SAEVRNADLR TARFSELREN ALNPAELILP
RDADPDAVIP WVTGYDLMGD EEILVPANAV FHPLPSSYTR LFRTNTTGLA SGNQLEEAIF
HGLAEVVERD AWSIAEHARS MGPLLRYNGD GLAGELLEMF QRAEVQVYVR DITSDVGVPT
FAAVSDDVKL KDPALLTAGM GTHTDPEVAL LRALTEVAQS RLTQIHGARE DTVSAEFRRM
MGYDRLKRLN RHWFEYEREE DFSSLNSYNT DDFLDDIRYM LDRLQTAGFE RAIVVDLTAS
EIMVPVVRVI VPGLEISAVD PERVGKRCRD AKNRRVSGPK HAS
|
|---|
| |