| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1221 |
|---|
| Symbol | |
|---|
| ID | 4462308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1317952 |
|---|
| End bp | 1318380 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639700237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_843640 |
|---|
| Protein GI | 116754522 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3364] Zn-ribbon containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCATA TGTGCACCAG ATGCAAAAAG GTATTCGATG ATGGCGCTGA TATACTCAAA
GGCTGCCCGA AGTGCGGCGG GAGGATGTTT GAGTATATTC GGGAGAGAGA GACGCTGATC
ACTGAGTCCA TGGGCGTCAG AAGGCCGCCC AAGAGAGCCG TCACCACAGC TGTTCGCGAC
AGAAATGAAA TTAAAGATGT GATGGGTGGA GATAGGGGCG CTTCTGAGAA GATCAAAAAG
CCTGCTGCCA TCCAGACTTC TCAGAGATCA CCTGAGGATC GGCCGATAGA GAGCGTGAGG
ATCACAGAGC CGGGAAGATA CGAGCTGAAC CTTCCGACGC TATTTTCAAG AGATGAGCTT
GTCATGGCGT TAAAGGAGGG GACCTATCTG ATAGACCTGA ACTCGGCCTT CAGAAGGTCT
AAGAAATAA
|
|---|
| Protein sequence | MPHMCTRCKK VFDDGADILK GCPKCGGRMF EYIRERETLI TESMGVRRPP KRAVTTAVRD
RNEIKDVMGG DRGASEKIKK PAAIQTSQRS PEDRPIESVR ITEPGRYELN LPTLFSRDEL
VMALKEGTYL IDLNSAFRRS KK
|
|---|
| |