Gene Mthe_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1161 
Symbol 
ID4462964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1242435 
End bp1245950 
Gene Length3516 bp 
Protein Length1171 aa 
Translation table11 
GC content57% 
IMG OID639700178 
Productchromosome segregation protein SMC 
Protein accessionYP_843583 
Protein GI116754465 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATATCA AGGAGATCGA GCTCAGGAAC TTCAAATCGT TCGGCAGAAG GGCTCTCGTA 
CAGCTTAAAA AGGACTTCAT AGTCGTCACA GGGCCCAATG GAAGCGGAAA ATCCAACATC
ATAGATGCCC TCCTCTTCTC GCTCTGCCTC ACGAGCTCCA GGGCGATGCG CGCTGAGAGG
CTGCCGGATC TGATTTACCG CGGCGATGAC GGAAGAGCCC CGGACTTCGC AGAGGTTACT
GTGAGGCTCG ATAACAGCAC CAGAACCATG CCTGTGGACA GCGATGAGGT TGTCATCACG
AGACGCATAA AGGTCAACGG CGAGAGGTAC CATGCGCAGC ACTACCTGAA TGGAAGGGCA
TGCACCCAGG CCGAGCTCCA GGAGCATCTG GCGAGAGCAG GAATAACCCC TGAAGGCTAC
AATGTGGTGA TGCAGGGGGA CGTCACGAGA ATAATCGAGA TGGGCCCCAC GGAGAGGAGA
AGGATAATCG ATGAGATCGC CGGAGTCTCC GAGTTCGAGG AGAAGAAACA GCGCGCAATG
GCTGAGCTCG ATGTCGTCAG GGAGAGGATC GCCCGCGTGG ATGTCATACT CGAGGAGGTC
GGCCAGCAGC TCAGGCGGCT CCAAGCCGAG CGCGACAGGG CTTTGAGATA CAGGGCATGT
CGTGAGGAGA GGAAGAAGCA GGAAGCCTAT CTTCTGCTTG CAAGATTCAA AGAGGCGGAG
GCCGAGATCA GCGCGCTTGA CGATGAGATC ACATCCATCA CCTCCGAGAA GTCTCAGCTT
CTACAGAGCC TTGAGGCTGG AAGAGAGGAG CTGAGGAGGC TTGAGGAGCG GCTGAAGGCC
GTGGAGGGCG AGATCAGCCA CAAGGGGGAG GACGAGCAGC TCAGGGTGAG GCGCGAGATA
GAAGAGATCA GGGGAAAGAT CGCGAGGGAG GAGACGAGGA TCGAGGCCGC TGATGCAGAT
ATAGAGGAGG CGGACAGATC CCTTAGCCAG TGCTTCATCG AGATGGACAG GGTGAGAGCT
GAGATCGCTG CCATCTCCGA GCAGCTCAGT GATAAAGCCA TGAGACGGGC TGGCATTCAG
GGGGAGCTGG ACGACCAGAG ATCCCAGCTC TCATCGCTCC GAGCAAACAT CTCCGATGCT
GATAGCAGGT TCGCCAAATA CAGGGAAGAG CTGGCTCAGC TGATTAAAGA GATTGAGGAT
ACCCGCTCCC AGATCGGAGA GAGACTCAGA GAGAGGGATC GGCTTCTCGA TGCAATCCGC
AGAGCTTCGA TGGAGAAGGA GGAGATCGCC ACAGAGATCA CAGAGGCGCT GAGCAGCATC
TCTGCTGCAT CCACAGAGTC TGAGAGGCTC GAGAGGGAGG TTGAGTCCAT CGCCTCAGAG
GCAATGGATC TCGATAAGAG AAGAGAGGAG CTGGAGTCGA GGAGGCTCAG CCTCCGCAGG
GAGCTGGCAG AGCTCGACAG GAGTCTCCAG AGGCTGCAGA GCGAGTACGC GAGGGTCGAG
GCCCAGGTCA GGGCAGCCGA GGAGAGGTCC GGCTACAGCA GAGCAGTAGA GGCAGTGAGG
TCTGCGATGA AGCGTGGCAT ACTCCAGGGC CTCTGCGGCA CGATCGCGGA TCTCGGAGAG
GTTGACAGGC GGTATGCTGC GGCGCTTGAG GTCGCAGCTG GTGCAAGGCT CCAGAGCGTG
ATCGCGGAGA GCGATGAGGA TGCAGCAGTT GCGATAGATT ACCTCAAGAG ATCCCAGATA
GGCAGAGCGA CATTTCTACC ACTCAACAAA ATGGAGGTAG GATCGCTGCC TGAGGTTCCA
AGGGTGCCAG GGGTCATCGA CTTCGCCCTG AACCTGATAA GATTTGATGA TCGTTTCTAC
CCTGCCTTCT GGTACGTCTT CAGAGACACG CTCGTCGTTG AGGATCTCGA TACCGCCAGG
AGGATGATCG GGCGATACAG AATGGTGACA CTTGATGGAG ATCTGATCGA GCGGAGCGGC
GCGATGACAG GTGGACACTA CACATCCCGC CTGAAGTTCG CAGCAGAGGA GAGCAGGAGG
CTTGTGGGGA TATCAGAACG CATATCAGCC ACAGAGGCGA GGAGAGGCGA GCTGCTCGAG
AAGCTCGATT CCGTCGAGGA GGAGATATCA TCCATCAGCA GAAAGCTCGA GTCCCTAGAC
AAGGAGATCT CGAGGAGGAC ATTCCTGCTG GAGGAGAAGC GAGCGCTGAG AGGCAGAATG
GAGCGGTACA TCGAGGAACG CAAGTCCAGG CTCTCGGAGA TGGAGAGGGA GAGCGAGGAG
TGGAGGAGCA GGCTCACAGT GCTGGAGCAG GAGATGCAGG AGCTCGAGTC CGCGCTCTCT
GAGAAGGGAG ATCTCAGGGA GAAGCTGGAG CGGGATATGC AGGGCTCCAG GATCCCTGAG
ATGATGGAGC GGGCGGAGCA GCTCGAAGGC GAGATCAGGA GGCTCGAGTC CAGGATCATG
GATCTGGACT CCGAGATCAT GCGCTGCAGA CTTAAGGAGG AGAACCTGAG GAACAGGCTG
GATGAGCTTG CGCGTACGAA AGAGCTCCTG GAGCTCAAGA AGAATGATGC GATCCAAAGG
CGCAGCTCAG CGCTCTCGAG CATGGAGGAT CTCAGGGCCG CACTGGATGA GCTGAGCAGA
AAAGAAAAGG ATCTCGACAG GGAGCTGCAC GGCCTGAAAG GGGAGAGGGG GTCTCTCATG
GAGAGCATAA TCGGCAAGGA GCGCGAGATA GGCGGGATGG AGAGAAGCAT CGAGCGTCTC
GATGCAAGGC TTACGGCGGT CTCAGGGGCA AGAGAGGAGA TCTCCATAAG CATGCAGTCT
CTCAGATCCG AGATTGAGAG CGCGGGCATC GATCCCTCTG AGGCTCCCCC CAAGAGCGAG
ACGATAGCTG CGAAGATCAG AGCGCTGGAG GAGGAGATGG CATCGCTCGA GCCTGTCAAT
ATGCTCGCCA TCGACGAGTA CGAGCGCGTT GATAAAAGAT TCCGCAACCT GAGCGATCGC
AGAGAGGTTC TTCACAGGGA GAGGGAGGGC ATCATAGAGA AGCTGGAGCG ATACGATCAG
CTCAAGAAAG ATGCCTTCAT GAGCTGTTTT GCTGCTGTGA ACCAGAACTT CAGGGAGATA
TTTCACGAGC TTTCCGGAGG AGATGGTGAG CTTGTGCTCG AATGCCCTGA CGATCCGCTG
AGCGGGGGTA TGACGATAAG AGCGAGGCCA GCTGGCAAGG TCTTCCACAG GCTTGAGGCG
ATGTCAGGTG GGGAGAAGAG TCTCACCGCG CTCTCATTGA TATTCGCGAT CCAGCGGTTC
AGGCCTGCTC CATTCTACGC GATGGATGAG ATCGACATGT TCCTCGACGG GGCGAACGTG
GAGCGGGTGG CTAAGATGAT TCGCAGGATC TCCAGGGATG CGCAGTTCAT AGTGGTATCG
CTGAGGCGCC CCATGATACA GCAGGCCAGC TACACAATCG GTGTCTCGAT GCAGGAAAAG
AACATCAGCA GCGTGACCGG AATATGTCTG AGCTGA
 
Protein sequence
MHIKEIELRN FKSFGRRALV QLKKDFIVVT GPNGSGKSNI IDALLFSLCL TSSRAMRAER 
LPDLIYRGDD GRAPDFAEVT VRLDNSTRTM PVDSDEVVIT RRIKVNGERY HAQHYLNGRA
CTQAELQEHL ARAGITPEGY NVVMQGDVTR IIEMGPTERR RIIDEIAGVS EFEEKKQRAM
AELDVVRERI ARVDVILEEV GQQLRRLQAE RDRALRYRAC REERKKQEAY LLLARFKEAE
AEISALDDEI TSITSEKSQL LQSLEAGREE LRRLEERLKA VEGEISHKGE DEQLRVRREI
EEIRGKIARE ETRIEAADAD IEEADRSLSQ CFIEMDRVRA EIAAISEQLS DKAMRRAGIQ
GELDDQRSQL SSLRANISDA DSRFAKYREE LAQLIKEIED TRSQIGERLR ERDRLLDAIR
RASMEKEEIA TEITEALSSI SAASTESERL EREVESIASE AMDLDKRREE LESRRLSLRR
ELAELDRSLQ RLQSEYARVE AQVRAAEERS GYSRAVEAVR SAMKRGILQG LCGTIADLGE
VDRRYAAALE VAAGARLQSV IAESDEDAAV AIDYLKRSQI GRATFLPLNK MEVGSLPEVP
RVPGVIDFAL NLIRFDDRFY PAFWYVFRDT LVVEDLDTAR RMIGRYRMVT LDGDLIERSG
AMTGGHYTSR LKFAAEESRR LVGISERISA TEARRGELLE KLDSVEEEIS SISRKLESLD
KEISRRTFLL EEKRALRGRM ERYIEERKSR LSEMERESEE WRSRLTVLEQ EMQELESALS
EKGDLREKLE RDMQGSRIPE MMERAEQLEG EIRRLESRIM DLDSEIMRCR LKEENLRNRL
DELARTKELL ELKKNDAIQR RSSALSSMED LRAALDELSR KEKDLDRELH GLKGERGSLM
ESIIGKEREI GGMERSIERL DARLTAVSGA REEISISMQS LRSEIESAGI DPSEAPPKSE
TIAAKIRALE EEMASLEPVN MLAIDEYERV DKRFRNLSDR REVLHREREG IIEKLERYDQ
LKKDAFMSCF AAVNQNFREI FHELSGGDGE LVLECPDDPL SGGMTIRARP AGKVFHRLEA
MSGGEKSLTA LSLIFAIQRF RPAPFYAMDE IDMFLDGANV ERVAKMIRRI SRDAQFIVVS
LRRPMIQQAS YTIGVSMQEK NISSVTGICL S