Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_1161 |
Symbol | |
ID | 4462964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 1242435 |
End bp | 1245950 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639700178 |
Product | chromosome segregation protein SMC |
Protein accession | YP_843583 |
Protein GI | 116754465 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATATCA AGGAGATCGA GCTCAGGAAC TTCAAATCGT TCGGCAGAAG GGCTCTCGTA CAGCTTAAAA AGGACTTCAT AGTCGTCACA GGGCCCAATG GAAGCGGAAA ATCCAACATC ATAGATGCCC TCCTCTTCTC GCTCTGCCTC ACGAGCTCCA GGGCGATGCG CGCTGAGAGG CTGCCGGATC TGATTTACCG CGGCGATGAC GGAAGAGCCC CGGACTTCGC AGAGGTTACT GTGAGGCTCG ATAACAGCAC CAGAACCATG CCTGTGGACA GCGATGAGGT TGTCATCACG AGACGCATAA AGGTCAACGG CGAGAGGTAC CATGCGCAGC ACTACCTGAA TGGAAGGGCA TGCACCCAGG CCGAGCTCCA GGAGCATCTG GCGAGAGCAG GAATAACCCC TGAAGGCTAC AATGTGGTGA TGCAGGGGGA CGTCACGAGA ATAATCGAGA TGGGCCCCAC GGAGAGGAGA AGGATAATCG ATGAGATCGC CGGAGTCTCC GAGTTCGAGG AGAAGAAACA GCGCGCAATG GCTGAGCTCG ATGTCGTCAG GGAGAGGATC GCCCGCGTGG ATGTCATACT CGAGGAGGTC GGCCAGCAGC TCAGGCGGCT CCAAGCCGAG CGCGACAGGG CTTTGAGATA CAGGGCATGT CGTGAGGAGA GGAAGAAGCA GGAAGCCTAT CTTCTGCTTG CAAGATTCAA AGAGGCGGAG GCCGAGATCA GCGCGCTTGA CGATGAGATC ACATCCATCA CCTCCGAGAA GTCTCAGCTT CTACAGAGCC TTGAGGCTGG AAGAGAGGAG CTGAGGAGGC TTGAGGAGCG GCTGAAGGCC GTGGAGGGCG AGATCAGCCA CAAGGGGGAG GACGAGCAGC TCAGGGTGAG GCGCGAGATA GAAGAGATCA GGGGAAAGAT CGCGAGGGAG GAGACGAGGA TCGAGGCCGC TGATGCAGAT ATAGAGGAGG CGGACAGATC CCTTAGCCAG TGCTTCATCG AGATGGACAG GGTGAGAGCT GAGATCGCTG CCATCTCCGA GCAGCTCAGT GATAAAGCCA TGAGACGGGC TGGCATTCAG GGGGAGCTGG ACGACCAGAG ATCCCAGCTC TCATCGCTCC GAGCAAACAT CTCCGATGCT GATAGCAGGT TCGCCAAATA CAGGGAAGAG CTGGCTCAGC TGATTAAAGA GATTGAGGAT ACCCGCTCCC AGATCGGAGA GAGACTCAGA GAGAGGGATC GGCTTCTCGA TGCAATCCGC AGAGCTTCGA TGGAGAAGGA GGAGATCGCC ACAGAGATCA CAGAGGCGCT GAGCAGCATC TCTGCTGCAT CCACAGAGTC TGAGAGGCTC GAGAGGGAGG TTGAGTCCAT CGCCTCAGAG GCAATGGATC TCGATAAGAG AAGAGAGGAG CTGGAGTCGA GGAGGCTCAG CCTCCGCAGG GAGCTGGCAG AGCTCGACAG GAGTCTCCAG AGGCTGCAGA GCGAGTACGC GAGGGTCGAG GCCCAGGTCA GGGCAGCCGA GGAGAGGTCC GGCTACAGCA GAGCAGTAGA GGCAGTGAGG TCTGCGATGA AGCGTGGCAT ACTCCAGGGC CTCTGCGGCA CGATCGCGGA TCTCGGAGAG GTTGACAGGC GGTATGCTGC GGCGCTTGAG GTCGCAGCTG GTGCAAGGCT CCAGAGCGTG ATCGCGGAGA GCGATGAGGA TGCAGCAGTT GCGATAGATT ACCTCAAGAG ATCCCAGATA GGCAGAGCGA CATTTCTACC ACTCAACAAA ATGGAGGTAG GATCGCTGCC TGAGGTTCCA AGGGTGCCAG GGGTCATCGA CTTCGCCCTG AACCTGATAA GATTTGATGA TCGTTTCTAC CCTGCCTTCT GGTACGTCTT CAGAGACACG CTCGTCGTTG AGGATCTCGA TACCGCCAGG AGGATGATCG GGCGATACAG AATGGTGACA CTTGATGGAG ATCTGATCGA GCGGAGCGGC GCGATGACAG GTGGACACTA CACATCCCGC CTGAAGTTCG CAGCAGAGGA GAGCAGGAGG CTTGTGGGGA TATCAGAACG CATATCAGCC ACAGAGGCGA GGAGAGGCGA GCTGCTCGAG AAGCTCGATT CCGTCGAGGA GGAGATATCA TCCATCAGCA GAAAGCTCGA GTCCCTAGAC AAGGAGATCT CGAGGAGGAC ATTCCTGCTG GAGGAGAAGC GAGCGCTGAG AGGCAGAATG GAGCGGTACA TCGAGGAACG CAAGTCCAGG CTCTCGGAGA TGGAGAGGGA GAGCGAGGAG TGGAGGAGCA GGCTCACAGT GCTGGAGCAG GAGATGCAGG AGCTCGAGTC CGCGCTCTCT GAGAAGGGAG ATCTCAGGGA GAAGCTGGAG CGGGATATGC AGGGCTCCAG GATCCCTGAG ATGATGGAGC GGGCGGAGCA GCTCGAAGGC GAGATCAGGA GGCTCGAGTC CAGGATCATG GATCTGGACT CCGAGATCAT GCGCTGCAGA CTTAAGGAGG AGAACCTGAG GAACAGGCTG GATGAGCTTG CGCGTACGAA AGAGCTCCTG GAGCTCAAGA AGAATGATGC GATCCAAAGG CGCAGCTCAG CGCTCTCGAG CATGGAGGAT CTCAGGGCCG CACTGGATGA GCTGAGCAGA AAAGAAAAGG ATCTCGACAG GGAGCTGCAC GGCCTGAAAG GGGAGAGGGG GTCTCTCATG GAGAGCATAA TCGGCAAGGA GCGCGAGATA GGCGGGATGG AGAGAAGCAT CGAGCGTCTC GATGCAAGGC TTACGGCGGT CTCAGGGGCA AGAGAGGAGA TCTCCATAAG CATGCAGTCT CTCAGATCCG AGATTGAGAG CGCGGGCATC GATCCCTCTG AGGCTCCCCC CAAGAGCGAG ACGATAGCTG CGAAGATCAG AGCGCTGGAG GAGGAGATGG CATCGCTCGA GCCTGTCAAT ATGCTCGCCA TCGACGAGTA CGAGCGCGTT GATAAAAGAT TCCGCAACCT GAGCGATCGC AGAGAGGTTC TTCACAGGGA GAGGGAGGGC ATCATAGAGA AGCTGGAGCG ATACGATCAG CTCAAGAAAG ATGCCTTCAT GAGCTGTTTT GCTGCTGTGA ACCAGAACTT CAGGGAGATA TTTCACGAGC TTTCCGGAGG AGATGGTGAG CTTGTGCTCG AATGCCCTGA CGATCCGCTG AGCGGGGGTA TGACGATAAG AGCGAGGCCA GCTGGCAAGG TCTTCCACAG GCTTGAGGCG ATGTCAGGTG GGGAGAAGAG TCTCACCGCG CTCTCATTGA TATTCGCGAT CCAGCGGTTC AGGCCTGCTC CATTCTACGC GATGGATGAG ATCGACATGT TCCTCGACGG GGCGAACGTG GAGCGGGTGG CTAAGATGAT TCGCAGGATC TCCAGGGATG CGCAGTTCAT AGTGGTATCG CTGAGGCGCC CCATGATACA GCAGGCCAGC TACACAATCG GTGTCTCGAT GCAGGAAAAG AACATCAGCA GCGTGACCGG AATATGTCTG AGCTGA
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Protein sequence | MHIKEIELRN FKSFGRRALV QLKKDFIVVT GPNGSGKSNI IDALLFSLCL TSSRAMRAER LPDLIYRGDD GRAPDFAEVT VRLDNSTRTM PVDSDEVVIT RRIKVNGERY HAQHYLNGRA CTQAELQEHL ARAGITPEGY NVVMQGDVTR IIEMGPTERR RIIDEIAGVS EFEEKKQRAM AELDVVRERI ARVDVILEEV GQQLRRLQAE RDRALRYRAC REERKKQEAY LLLARFKEAE AEISALDDEI TSITSEKSQL LQSLEAGREE LRRLEERLKA VEGEISHKGE DEQLRVRREI EEIRGKIARE ETRIEAADAD IEEADRSLSQ CFIEMDRVRA EIAAISEQLS DKAMRRAGIQ GELDDQRSQL SSLRANISDA DSRFAKYREE LAQLIKEIED TRSQIGERLR ERDRLLDAIR RASMEKEEIA TEITEALSSI SAASTESERL EREVESIASE AMDLDKRREE LESRRLSLRR ELAELDRSLQ RLQSEYARVE AQVRAAEERS GYSRAVEAVR SAMKRGILQG LCGTIADLGE VDRRYAAALE VAAGARLQSV IAESDEDAAV AIDYLKRSQI GRATFLPLNK MEVGSLPEVP RVPGVIDFAL NLIRFDDRFY PAFWYVFRDT LVVEDLDTAR RMIGRYRMVT LDGDLIERSG AMTGGHYTSR LKFAAEESRR LVGISERISA TEARRGELLE KLDSVEEEIS SISRKLESLD KEISRRTFLL EEKRALRGRM ERYIEERKSR LSEMERESEE WRSRLTVLEQ EMQELESALS EKGDLREKLE RDMQGSRIPE MMERAEQLEG EIRRLESRIM DLDSEIMRCR LKEENLRNRL DELARTKELL ELKKNDAIQR RSSALSSMED LRAALDELSR KEKDLDRELH GLKGERGSLM ESIIGKEREI GGMERSIERL DARLTAVSGA REEISISMQS LRSEIESAGI DPSEAPPKSE TIAAKIRALE EEMASLEPVN MLAIDEYERV DKRFRNLSDR REVLHREREG IIEKLERYDQ LKKDAFMSCF AAVNQNFREI FHELSGGDGE LVLECPDDPL SGGMTIRARP AGKVFHRLEA MSGGEKSLTA LSLIFAIQRF RPAPFYAMDE IDMFLDGANV ERVAKMIRRI SRDAQFIVVS LRRPMIQQAS YTIGVSMQEK NISSVTGICL S
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