| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0956 |
|---|
| Symbol | |
|---|
| ID | 4461790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1040810 |
|---|
| End bp | 1041844 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699976 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_843384 |
|---|
| Protein GI | 116754266 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.417373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGGC TTCTGGTCAC TGGCGGCTGC GGGTTCATAG GGAGCAACTT CATACATTAC
GCGCTCAGGG AGCATGACGA CTGGGAGGTC GTGAATCTCG ACAGGCTGAC GTACGCCGGG
AACCCTGCGA ACCTTAGTGA TATCGAGGGG GATGAGAGGT ACAGGTTTGT GAGGGGGGAT
ATCGCGGACA GGGATCTTGT GGATGGTCTC TTCAGGGATG GGCTGGACGC GGTGGTGAAC
TTCGCGGCTG AGACCCATGT TGACAGGAGC ATCCTCGACC CATCGCCGTT CATAGATACG
AACGTGAGGG GCACGCAGGT GCTGCTCGAG GCTGCGAGGA ATCACGATGT GGGGAGGTTC
GTTCACATAT CCACAGACGA GGTCTACGGG TCCGTGACTG AGGGAAGGTT CACAGAGGAC
TCGCCTCTGA GGCCTAACAG CCCGTATGCG GCGAGCAAGG CAGCTGCAGA TCTCCTCTGC
AGGGCGTACC ACATCTCCTA CGGCGTGCCT GTGATGGTCA CGCGGAGCTC GAACAACTAC
GGGCCGTACC AGTTCCCTGA GAAGCTCATA CCGCTGATGA TAAGAAACGC TCTGGCTGGA
ATGGATCTTC CTGTCTATGG AGAGGGCGCG CAGGTCCGGG ACTGGCTCTA TGTGGAGGAC
AACTGCAGGG CGATCGGGGT GGTGCTAATG AAGGGCAGGC CCGGGGAGAT CTACAACATC
GGAGGTGGAT CTGAGAGGAG GAACATCGAG GTTGTGGAGA TGATCTGCAG GGTGCTTGGA
GAAAGATTGA ATAGAGATCC TGAGGATTTT AAGAGACTGA TAAAGCACAT CCGCGATCCC
AGGGGCGCGG CCCATGATTT CAGGTACGCG CTCGAGTGCT CTAAGATGAG AGGGCTCGGC
TGGATGCCGC AGGTCACGTT CGAGGATGGG CTGGCCCGGA CTGTGGACTG GTATCTTGCG
AACCAGGACT GGGTCGAGGG CGTGATAACA GGGGAGTACC TGGAGTACTG CCGGAGGGTG
TATGGGGACG GCTGA
|
|---|
| Protein sequence | MMRLLVTGGC GFIGSNFIHY ALREHDDWEV VNLDRLTYAG NPANLSDIEG DERYRFVRGD
IADRDLVDGL FRDGLDAVVN FAAETHVDRS ILDPSPFIDT NVRGTQVLLE AARNHDVGRF
VHISTDEVYG SVTEGRFTED SPLRPNSPYA ASKAAADLLC RAYHISYGVP VMVTRSSNNY
GPYQFPEKLI PLMIRNALAG MDLPVYGEGA QVRDWLYVED NCRAIGVVLM KGRPGEIYNI
GGGSERRNIE VVEMICRVLG ERLNRDPEDF KRLIKHIRDP RGAAHDFRYA LECSKMRGLG
WMPQVTFEDG LARTVDWYLA NQDWVEGVIT GEYLEYCRRV YGDG
|
|---|
| |