Gene Mthe_0939 details

Gene Information

• Locus tag: Mthe_0939
• ID: 4463332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: -
• Start bp: 1024616
• End bp: 1026760
• Gene Length: 2145 bp
• Protein Length: 714 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639699959
• Product: TPR repeat-containing protein
• Protein accession: YP_843367
• Protein GI: 116754249

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCAAT TAGTAGTGCT TCATGAGATA TTCGAGTCGT TCTCCAGGGG CACCGGCGCC 
CTCCGCGATA TCGAGCCCAG GGCGGTTGAG GGCAGGTGTG CCAGTCTTGT GGTCAAGCTC 
CTGCAGAGCT GTCTCGATGG TGATATCGAT GAGGAGGTGT GTCGCGAGCT CTCCGAGTGC 
CTGAGCAATA TCTATGAGCT CAAGAGGCTG GGCGACATAT GCCGGAGGGC AGGCATGCCC 
GAGATCGCGA TGAAATGCTA CTCGAAGGCG CTCTCCCAGG CACAGGAGCC GCATGTCCGC 
TCTGTGCTGC TGAACAACCT CGGCCAGGTC CATGCGCAGA AGGGCGACCT GAGCAAGGCG 
ATTGTATACT ATAAAAAAGC CCTGGAGGGA TTCGAGTATG CAGGAGATCC GAGCAGCGCT 
GCCCATGTCA TGGGGAACCT AGCATCTGCG TACAGGCGCG CGTACCAGTG GGATCGAGCC 
GTGGAGTGCT ACTTCAAGGG TCTGAAGGGA TTTGAGAAGC TCAACGACAG CTTCGGCGTC 
GCCCAGATGA CCGGATCCCT GGGAAGGGTG TACGCAGAGA TGGGCGAGAG GGAGCTTGCT 
GTCTTGTATT ATGAGAAGAG CCTGAGGATG TTCGAGCAGC TCGGGGATCG CAGGAGCGCG 
GCCTGGCTTC TGAGCCGCCT TGGAAGGGTG TACGCAGAGA TGGGAAGGTG GGACGACTCG 
AAGAGATGTT TTGATAGAAG TTTGTCCATC TTCGAGGATC TCGGTCAGAG CCAGAACGCG 
GGCATAGTCC TCTCAAACCT CGGCCGCTTC TACCTGGAGA AGGGGGATCC TGATTCAGCC 
AGGGTTTCCC TGGAGCGCGC GCTGAAGCTG TTGAGAAAGG AGATGCTGCC TGTTTACCCG 
AACACGGTTG CGGCGCTCGC GGCCGCTTAC AGCCTGCTCG CGAGCAGGTA CGCTGCTGAG 
AGAAATGCGA AACAGTCGTC TCAGCTTTAC TCGAATGCAT CTGACTGCTT CAGCGAGCTT 
GCGCTCCATC CCAGGATTCT CATATCGGAG CTGAAGGCGG CTGCTGGACA GGCGAGATCG 
CTTTCCTATC TTGTGAAGCT CCGCGCAGAA CCCCGCGGGG ATGAGGCCGT CGCCTTGTGC 
GAGAGAGCGA TATCTGCGCT CGAGAGCACG ATCGCCAGCA CCACATCGAA GGACAGGGAG 
AAGGTCGCAT CACTCGTCCG GTGTCTGGAG GGGATAAAGG AGCTCTGGAG CATAGATCTC 
TACGCAGCGG AGCCGTGGCG GATACTCAGC ATGGTCTCCG TGGCCTGTGA GTACCTGATG 
GGTGGCATTC GGGAGCTTGC TAAGACCCTG GGACCGTACA AGGAGATGTA TGAAGCTCTT 
GGTGCCATCA ACGGGGCGCT AGATGACGAG AGGCAGCGCA GAGACTCTTC GGCGAACCTG 
AAGAGAGCTG CTGAGCATCT TCGGGCATCA CAGACTGAAA GCTTCGAGAA GATCGCCGAA 
ACGCTCGAGA TGGCTGGAAG ATCCGAGCTT GTTCAGGGAA TGAGTCCGTC TGACATACTG 
AACTATGGAG CTCACAGAAA GGCTCTCATG AGCATCGGCT GGGCTGCAGC GCAGAGCCTG 
CTATCGGAGA TCGACAGGAC TGGATGGATC TACGCATGGG ACGAGTCGAT GAATCTCTCA 
GAGATGGGGC CGGTTGGAAG GACCGAGCGG ATAAGGAGAA AGGCGGAGAG CATCGCGGAG 
ATGAAAGAGG TGCCTGTGGT AGAGGTGGGT TCTGTGAACA TCAGGGGCTC TGCAGTTGAT 
GTGCCGGTGG AGAGCGCTCT CGGGAACACA TCCATTGTGC CCACACAGAC CGTGCTTGTG 
TCTGCTGCAA CATCGCTGCC TGCTCGTCCT GAGACCGTGC GCCCTGAGAT TACGCTTGAG 
GGGCCATACG TCATCGAGAG CTTCGAGGAT TATGAGCAGG AGGGTGCATT TTACGATGAG 
CCTCACAGAG ACAATCCCAC TGCTGGTACC GGTTGCGCAG AGTCTGCCTA TGTGGCTCAA 
AGAGGCCATC TGCGGGACTC GATCGCCGCG AGGATCATCG TGGGGCTGAT AGCGCTGGCA 
GGGACGGCAT ACGCGATAAT GCATGTGATT CTGGGGGTTC TGTGA 

 

Protein sequence

MDQLVVLHEI FESFSRGTGA LRDIEPRAVE GRCASLVVKL LQSCLDGDID EEVCRELSEC 
LSNIYELKRL GDICRRAGMP EIAMKCYSKA LSQAQEPHVR SVLLNNLGQV HAQKGDLSKA 
IVYYKKALEG FEYAGDPSSA AHVMGNLASA YRRAYQWDRA VECYFKGLKG FEKLNDSFGV 
AQMTGSLGRV YAEMGERELA VLYYEKSLRM FEQLGDRRSA AWLLSRLGRV YAEMGRWDDS 
KRCFDRSLSI FEDLGQSQNA GIVLSNLGRF YLEKGDPDSA RVSLERALKL LRKEMLPVYP 
NTVAALAAAY SLLASRYAAE RNAKQSSQLY SNASDCFSEL ALHPRILISE LKAAAGQARS 
LSYLVKLRAE PRGDEAVALC ERAISALEST IASTTSKDRE KVASLVRCLE GIKELWSIDL 
YAAEPWRILS MVSVACEYLM GGIRELAKTL GPYKEMYEAL GAINGALDDE RQRRDSSANL 
KRAAEHLRAS QTESFEKIAE TLEMAGRSEL VQGMSPSDIL NYGAHRKALM SIGWAAAQSL 
LSEIDRTGWI YAWDESMNLS EMGPVGRTER IRRKAESIAE MKEVPVVEVG SVNIRGSAVD 
VPVESALGNT SIVPTQTVLV SAATSLPARP ETVRPEITLE GPYVIESFED YEQEGAFYDE 
PHRDNPTAGT GCAESAYVAQ RGHLRDSIAA RIIVGLIALA GTAYAIMHVI LGVL