Gene Mthe_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0877 
Symbol 
ID4461834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp947187 
End bp949580 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content48% 
IMG OID639699896 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_843305 
Protein GI116754187 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTAC ATGCAACCCT ACATATGAAA GATATTTACA CCATATTAAA GGGCAACTCT 
AGTATATACT TGATCACATT GATCATGGTT TTTGCCATCT TTACCGTTCT CTGCAATGTT
GGCATATCTG ATTGGCCACA GTATCAGCAG GATGGATTTA ACTCCGGAGT GACTTCTGAA
AGATTCCCCG AATATCCTGT AATCCTATGG TCCGCAGATA TACAGAGGGT CGATGTTACA
CCAGTAATTT GTGACGGAGC AGTATATGTG ATTGCAGGAA ATGGCACCCT TTACGCATTT
GATGCGGGCA CGGGAGAGGC CATATGGGCC TCGCATCTCG ACGGCTGGGT TTTCCAGACC
TCCACACCAG CTTGTGGTGG GAAGAAGGTA TTTGCTGCAA CCGATTCTGG AAATCTCGCA
GCTGTTGATC GACTGACAGG AATTAAATTA TGGAATTACT CACTTACAGA CAAGAGATTT
GAAGCTCCTC TGACATATGA CGGTTTGCGA TTGTACATAG GTGAGGGCAG CGCGTATGGA
ACTTCAGAAA AGAAATTCTT TTGCATATTT GATAATGGTA CTGAATGCTG GAACTATACT
TCAGAAACAA AAGGATATCA ATGGTGCGGA TCTTGCAGTA TCGGCAATTA TGTTGTAGTG
GGACAGAATG ATGGCATCAT TTTAAGCTTG AACCGAGTGA ACGGAGAAGT AGCAGATGCT
TTGAGTCTCA ACGATAGCAC AAGGCTCAGT TTTTCGCAGA ATAATCCGGG CCGAATCAGA
GCACCAGTCA CATGCAAAGA TGGTTGGATC TATACAACAT CCGAGATCAC AGCAAATGAG
GGTTATGTCT GGAAGATAGC TTTTGACAAA GAGACAGGAA GATTCGAAGA CCGCGGCTGG
AGTGTGCCTA TTGGATTTAG CACGTCGACT CCAGCGATCT TTGCGGACAG AGTATATCTC
GGAGTTGGCG AACATGGTCA TCCTGGGGCC TTGGTGTGCA TCAATGATAC CAGTGGTGAT
ATGATATGGA CCTATCCTGT GGAGGCAGGT GTTAAAGCGT CTCCAGCGAT CTCAACGGCC
TACGATAAAC CGCGAATCAT CTTCAACACA GCTCAGATCG ACGGTTCTGT GTATTGTATC
GAGGATTCAG GAGATCGTGG TGAGCTTCTC TGGAAGTTTG ATCCACCAGA TAATGGCTAT
ATCTTGGGAG GTGTAGCCGT ATATAAAGGT CGACTGTACT TTGGAACCGA AGGGGATCAG
CACTATGGGA AGCTTTACTG TCTAGGCGAT GATGAATGGT CGCAGTTCCA TCATGATCCG
CAGCATACAG GGCTCTCAAG ATCCAAAGCT CCCAGAGACA ACCGCACTGC ATGGATAAGT
GAAGATATCA GAGCTCAACC AGGCTCCTCG GTCTCGGTGG CCAGTGGGAT GGTTTTCGTA
AACTGTGTTG ACAGGTTGGT CTGCCTGGAT CAGATATCCG GTAGGGTGCT GTGGTCGCAT
CCATTCAAGT CAGCGGGAGA TTATGCATTC GGTTTCACTC CAGTGTATCA TGACGGCAAA
GTCTTCTTCA CATCGGATAG AACATATTGT CTCAACGCGT CCGACGGAGA GGAGGTCTGG
AGCTATACGC CACCAACAGG CAGGTTCGCC ATCGATGGCA GCCCGGCGAT AGCGGAGGGA
AAGATCTTCG TGAGCGACTG GGATGGTCAT CATTACTACT GCCTTGAGGA AGAGACGGGC
AAAGAGATCT GGAACTTTAC AGTGGAAGGA AATGCACAAT CCACGCCTGC AATCGATCTA
AATAGATTGG TATTTGGCAG CTGGGAGTGG GGGCTTGGCG GGAGGATCTA TTGTGTTCAT
CTCAATAACG GCACGGAGAT ATGGAATTTG AGCACTGAGA ACTCGCCCTG TGGTTCGGCT
ACGATAAATG ACGGCGTGGT TTACATGCCA ACCTACAACT TTGATGGTGA TGGAGACCTT
CTCGCTTTAT CTCTGGTGAA TGGATCCATC CTCTGGAGAG CGGAGATAAG TCCAACAGAT
TCGACTCCTG CATTTGCCGA TGATAGAGTG TATGTTTGTG GAGGCTGTGA GGGATTCAGC
AAACTGCACA CATACTGCTT TGATGCAAAG ACTGGCGAGC TGATATGGAA AACACCTTCA
GAGCTGGAGA TCGGCGACTG GAGGTGCTCT CCGGCATATG CTGATGGACT CGTGTTTGTT
GGCAGGCCGG ATTTTATGGA ATATGATGGC ATATTTGCCT TAAATGCCAC AACAGGGGAG
ATCGTCTGGA GCTATCCAGC TGGTGGATCC TCACCGGCAG TCGCTTGTGG TATGGTCTTC
ACCATCGGAA ACGGCAGGGT GTACGCATTT GGAGATTCAA AAGCTACAGG ATGA
 
Protein sequence
MRVHATLHMK DIYTILKGNS SIYLITLIMV FAIFTVLCNV GISDWPQYQQ DGFNSGVTSE 
RFPEYPVILW SADIQRVDVT PVICDGAVYV IAGNGTLYAF DAGTGEAIWA SHLDGWVFQT
STPACGGKKV FAATDSGNLA AVDRLTGIKL WNYSLTDKRF EAPLTYDGLR LYIGEGSAYG
TSEKKFFCIF DNGTECWNYT SETKGYQWCG SCSIGNYVVV GQNDGIILSL NRVNGEVADA
LSLNDSTRLS FSQNNPGRIR APVTCKDGWI YTTSEITANE GYVWKIAFDK ETGRFEDRGW
SVPIGFSTST PAIFADRVYL GVGEHGHPGA LVCINDTSGD MIWTYPVEAG VKASPAISTA
YDKPRIIFNT AQIDGSVYCI EDSGDRGELL WKFDPPDNGY ILGGVAVYKG RLYFGTEGDQ
HYGKLYCLGD DEWSQFHHDP QHTGLSRSKA PRDNRTAWIS EDIRAQPGSS VSVASGMVFV
NCVDRLVCLD QISGRVLWSH PFKSAGDYAF GFTPVYHDGK VFFTSDRTYC LNASDGEEVW
SYTPPTGRFA IDGSPAIAEG KIFVSDWDGH HYYCLEEETG KEIWNFTVEG NAQSTPAIDL
NRLVFGSWEW GLGGRIYCVH LNNGTEIWNL STENSPCGSA TINDGVVYMP TYNFDGDGDL
LALSLVNGSI LWRAEISPTD STPAFADDRV YVCGGCEGFS KLHTYCFDAK TGELIWKTPS
ELEIGDWRCS PAYADGLVFV GRPDFMEYDG IFALNATTGE IVWSYPAGGS SPAVACGMVF
TIGNGRVYAF GDSKATG