Gene Mthe_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0728 
Symbol 
ID4461879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp769675 
End bp770193 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content53% 
IMG OID639699738 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_843158 
Protein GI116754040 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA TTGCGCTGTT TCTGTTCGCT CTGGGCACAG TGTCTTTGTT GCTCTCCATG 
AAGATCTCCT CAGCTGCCAG ATCATTGCGC CAGAGGTATG GGCTGCCTGA TGGGGACGCA
ATCTACTCGG ATCTCTCCGG CTCCGGAAAG ATTCTTCGCT CAGAGCGCTA TGGCCTTTCA
GGAAAACCGG ATTCCATAAT CAAAGAGGGC AGACATCTGA TACCCGTCGA GGTCAAGAGC
AGCCTGACAG AAAAGCCGTA CAGGAGTCAT CAGCTTCAGC TCGCAGCCTA CGGCCTGATC
ATGGAGGAGC TCTACAGAAC AGATGTTCCA TATGGCTACA TCGTCTACGG AAACAGGCGC
CACAGGATAG AGCTAGATGG AGATCTCAGG GATGAGGTGC TGAGCGCACT CGACGAGATG
AGACACGCGC TGAGAAATGG TCATGCTCAG AGGAATCACA ACCATCGGGC GAGATGTGCG
AAGTGCTCAT TTCGCAAGGG CTGCAAACAG GCGCTATGA
 
Protein sequence
MNEIALFLFA LGTVSLLLSM KISSAARSLR QRYGLPDGDA IYSDLSGSGK ILRSERYGLS 
GKPDSIIKEG RHLIPVEVKS SLTEKPYRSH QLQLAAYGLI MEELYRTDVP YGYIVYGNRR
HRIELDGDLR DEVLSALDEM RHALRNGHAQ RNHNHRARCA KCSFRKGCKQ AL