| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0703 |
|---|
| Symbol | |
|---|
| ID | 4463476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 740732 |
|---|
| End bp | 742450 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699713 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_843133 |
|---|
| Protein GI | 116754015 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.313338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAG AGAAGCCACT CAAGATACTT CTCATGGGCA ACCCGAACGT GGGGAAGAGC
GTGATATTCT CGAGGCTGAC AGGTGCTGAT GCCATCTCCT CGAACTATCC CGGAACAACT
GTGAGCTACA CAGAGGGCAG CATAAATGTG CTGGGCAGAA GCGCCGCGTT GATCGATGTG
CCCGGTGTGT ATTCACTTGA TCCGAGCTCA AAGGCGGAGG AGGTTGCGAA TCTCATACTG
GAACAGGGCG CTGATCTGAT AGTCAACGTT GTGGACGCGA CAAACCTGGA GAGAAACCTG
AATCTCACCC TGGAGCTCCA GGAGCGCGGT ATCCCGATGG TAGTCGCACT CAACCTCTGG
GATGTTGCTG TGAGAAGGGG TCTGGAGATA GATGTCAAGA GACTCTCAGA GGAGCTGGGC
ATAAAGGTCG TGCCAACTGT TGCAGCAAGC GGCCTTGGGA TACGCGATCT CGTCGAGGCG
ATCGAGATCT CCATGAGCTC AAGACCGCCT GCATTGAGCC TCGATCCCAC GGAGAGATGG
CAGAGGGTGG GTGAGATAGT ATCGAGGGTG CAGAAGGTCC ATCACCGCCA TCCATCTCAC
CTCGAGCGGC TGGAAGACCT CACGATACGA CCATGGACAG GAATTCCCGT GGCGCTCATC
GTCCTCTATC TCTCATTCAG CCTGATCGTG GGAGCCGGAG AGCTGTTTAT TGAGAATGTG
AGCGACCCGT TCTTTCTCAG ATACAGCTAC TGGGTATTCG CGCTGGCTGA TAGATACACA
TCTGGACTCT TGCATGACAT ACTTGTGGGA AGATCTCCTG AGCTGCTCGA GTCGTTCGGC
CTCCTGACAA CCGGACTGTA CATACCATTC GGCATCGTCC TCCCATTCCT CATACCATTC
TATCTGGTGC TGGGGTTCCT CGAGGACCTG GGGTACCTTC CCAGGGTGAG CGTGCTCATG
GACGCTCTTA TGCACAGGCT TGGCCTCCAC GGTGCTGCGA TAATACCGTG CGTCCTCGGG
ATGGGCTGCA GCGTTCCTGG CGTCCTGGGG CTGCGCGTTC TGGAGTCGTC GAAGCAGCGC
TTCCTTGCAG CAACGCTCAT GACAATGAGC ATACCCTGCG CATCGCAAAC CGCCATGGTC
TTCGGAATCC TGGCTCCACA CGGTCTTAGA TACATATTTG CAGTCTACGC AACCCTCCTC
ATAGTATTCA TCATCTCTGG CATGATCCTC CACAGGCTGA TCCGAGAGGA GTCACCAGAG
ATATTCATGG AGATCCCTCA GTACAGGATG CCCGTGATCG GTGCTCTGCT CAAGAAGACA
TTCGTGCGCA TCAGGACGTT CATATCAGAG GCTGTTCCCT ACATAGGAAT TGGCATAGTT
GTGATGAATG TCTTCGAGAT CACGGGTCTC ATGAAGGCCA TCGGCGAGCT GGCAAGCCCG
ATCGTCTCGG GCATTCTCGG CCTCCCAGCG GATGCTGCGA CTGCACTCAT TCTGGGCTTC
CTGAGAAAGG ACATCGGCAT AGGCATGTTT GTACCTCTCG GTCTCACACC GGAGCAGCTC
GTCATAGCTG CTGTTGTGCT CGCGATGTAC TTTCCATGCG TCGCAACCCT GACGGTGCTG
ATGAAGGAAC TCGGTCCGTA TGATACAATC AGAGCGGTGG TCTTCCGCCT GCTCGCAGCT
GTGATGGTGG GCGGTATGCT CAGAGTTATT CTTCTGTGA
|
|---|
| Protein sequence | MHEEKPLKIL LMGNPNVGKS VIFSRLTGAD AISSNYPGTT VSYTEGSINV LGRSAALIDV
PGVYSLDPSS KAEEVANLIL EQGADLIVNV VDATNLERNL NLTLELQERG IPMVVALNLW
DVAVRRGLEI DVKRLSEELG IKVVPTVAAS GLGIRDLVEA IEISMSSRPP ALSLDPTERW
QRVGEIVSRV QKVHHRHPSH LERLEDLTIR PWTGIPVALI VLYLSFSLIV GAGELFIENV
SDPFFLRYSY WVFALADRYT SGLLHDILVG RSPELLESFG LLTTGLYIPF GIVLPFLIPF
YLVLGFLEDL GYLPRVSVLM DALMHRLGLH GAAIIPCVLG MGCSVPGVLG LRVLESSKQR
FLAATLMTMS IPCASQTAMV FGILAPHGLR YIFAVYATLL IVFIISGMIL HRLIREESPE
IFMEIPQYRM PVIGALLKKT FVRIRTFISE AVPYIGIGIV VMNVFEITGL MKAIGELASP
IVSGILGLPA DAATALILGF LRKDIGIGMF VPLGLTPEQL VIAAVVLAMY FPCVATLTVL
MKELGPYDTI RAVVFRLLAA VMVGGMLRVI LL
|
|---|
| |