| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0651 |
|---|
| Symbol | |
|---|
| ID | 4463145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 685957 |
|---|
| End bp | 687708 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639699659 |
|---|
| Product | CRISPR-associated TM1812 family protein |
|---|
| Protein accession | YP_843081 |
|---|
| Protein GI | 116753963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02221] CRISPR-associated protein, TM1812 family
[TIGR02549] CRISPR-associated DxTHG motif protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0409281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTA GTTTACTGTG CATTAACTGC CGGCTGAAGA TTTGTATGGA TCGATACATT
ATGGATAATC GCGTTCTTTT GACTGCCCTG GGGCTCAACC CAAAGGAGAC GACGTACACA
CTGGGGAACA GAACCTGCAA GTCCCTCCTG TCCCCTGTGG CTCTGTACAA TCTGCTTCCG
GAAGATGAGC GGTTCGATAG AGTGCTGGCC CTCTGCACGG AGGAGGTTCT CGAAAAGACG
TTTCCCCTGC TCAGGGAGGA GCTGCCTGTC ATGTGTGAGC CCACGCGTGT CCACAGCGGC
GTCAGCGCTG GCGATCTTCA GGCGACCCTG CATAACATGC TGGAGAAGAT ACCGGAGAAG
GCAGAGCTCA TCCTGGATGT GACGCACGGC TTCAGGCACT ACCCGTTTCT GTTCTTCACC
GCATGCCTGT ATCTGAAGGC TCTGAAGGAT GTTAAGATCA AAAAGATCTG GTACGGAAGG
TTGGATGCAA AGAACCCTGA TGGTGCAACA CCATTCATCG ATCTGAGCAT CCTCCTTGAG
ATGATCGACT GGTTCCGAGT CGTTCAGTCC TTCAGGGATA TGAGCAACCC GAAGGCCCTT
GCGGATAAGT TGCTTGCATA CAAGAGAGAT GTGATAAAGC CGGATACGAA CATACCTCCC
TCCACTAAAA AGAAATACAG CGCGGTCTCC AGCGCTGCAA AGGAGTTCGC AGAGCTGTTC
GGCATAGGCC TTCCAGTGGA GATCGGCATG GCTTCAGCAG ATCTGCAGAG GCTGATAGAA
GAGCTTCGTG TGGAGGGAGA TCTTTCAGCA ATAAAGATCC TCCTGGCAGA GGATCTGCTG
CTGGAGATAG AAAATGCAGC AGAGCGCTTC AGGCTGCCAG AGGGCGTTGA AAAGAAAGAT
CTCATTCTCG ATATCGGGGA GATCCACAGG CAGGAGAAGC TAATAGATGC ATACTTCGAG
GCAGGTTACC ACAACAACGC TATCGGGCTG ATCAGAGAGC TTATCATAAG CAGGCTAATG
CTCGAAGATG AGGATGGCAG GAATAGCTGG CTCGACAAAT CACAGCGAGA GAAGATCGAA
CGATGTATTG GAGCCCTCAT GGATTACAGC AAAAAGAACA GCGCAGATCT TACAAAAGAC
AGGAAAGAGC TTGCTGGTAT ATGGAGCTCC GTTATCGACG CCAGAAATAA GTTGCACCAT
TATGGGATGA CGAAAGATAT TGTGAGTGAT AAACAAATCG GGATCCCGAA GTGGTGGGAC
GATCTGAAGC AGCGTCTCGA CGACAATTCG TTTTGGGATT GCGGTTTTGG AGGTGGCTCT
GGCAGGCTTC TGATCTCGGC ACTTGGCCTT CACCCAGGCT TTCTCTATAC CGCTCTGAGG
AATGTGAATC CAGAGTTATG CCTGGTGATT GCATCACACG AAACTGTGGG CAGATGGGAT
GAGCTCGCCA GAATGGCCAG TTACAGTGGC GATTTCGATG TTAAGGAAAT GGATGCACAT
TCATTTGACG ATGGCAAAAC CATCGTTGTC AACTCAGGGG AGCTTCTCGT CAGATTCGAT
GAGGTTGTGT GCAACCTGAC GGGTGGCACA GCTGCCATGC AGTATGCGGT CATCCAGCTG
GCAAGGAGGG CAGAGCGGTT GGGAAGAAAT GTCAGATGGA TCGCGGTCAT CGATAATCGT
TCAATTGAGG AGCAGAATCT GAACCCTTAC GTCGAGGGGG AGGTGGTCTT TTTGGAGGAT
GCAGGGATAT GA
|
|---|
| Protein sequence | MGFSLLCINC RLKICMDRYI MDNRVLLTAL GLNPKETTYT LGNRTCKSLL SPVALYNLLP
EDERFDRVLA LCTEEVLEKT FPLLREELPV MCEPTRVHSG VSAGDLQATL HNMLEKIPEK
AELILDVTHG FRHYPFLFFT ACLYLKALKD VKIKKIWYGR LDAKNPDGAT PFIDLSILLE
MIDWFRVVQS FRDMSNPKAL ADKLLAYKRD VIKPDTNIPP STKKKYSAVS SAAKEFAELF
GIGLPVEIGM ASADLQRLIE ELRVEGDLSA IKILLAEDLL LEIENAAERF RLPEGVEKKD
LILDIGEIHR QEKLIDAYFE AGYHNNAIGL IRELIISRLM LEDEDGRNSW LDKSQREKIE
RCIGALMDYS KKNSADLTKD RKELAGIWSS VIDARNKLHH YGMTKDIVSD KQIGIPKWWD
DLKQRLDDNS FWDCGFGGGS GRLLISALGL HPGFLYTALR NVNPELCLVI ASHETVGRWD
ELARMASYSG DFDVKEMDAH SFDDGKTIVV NSGELLVRFD EVVCNLTGGT AAMQYAVIQL
ARRAERLGRN VRWIAVIDNR SIEEQNLNPY VEGEVVFLED AGI
|
|---|
| |