| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0529 |
|---|
| Symbol | |
|---|
| ID | 4462721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 545974 |
|---|
| End bp | 546897 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699534 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_842960 |
|---|
| Protein GI | 116753842 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0717858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTATTA TATTTCCGCG CAAGATCGAT GGAGATCAGC ATTGTTGCTT AAATAGTTTC
GAGACGAATT CGATGATATC AATTACTGCG CTGACAAAAG AGTATTCAGG GCGGTGTGTG
GTCGACGATC TGAACCTCCA TGTTGCCCGG GGGGAGCTGT TCGGCTTTCT GGGGCCGAAC
GGTGCTGGAA AGACCACAAC CATTCGGATA ATCACGACGC TGACCAAGCC GAGCTCCGGG
AGGGTTCTCA TCAATGGCAT AGATGTTGTG AGGCATCCCT CGCGAGTCAA GGCCGAGTTC
GGTGTTGTGC AGCAGCACAT GAGCCTGAAC AGGGATCTGA CGATAGAGGA GAACCTCGAG
CTGCATGCGA GACTCCATCA CATTCCGCGA TCCGAAAGGC GTGAACGGAT ATCCGAGCTT
CTGGAGTACG TTGGCCTGGA GGAGCATGCG GATTACCTGA TAGATGATGT CTCAGGTGGG
ATGAAGCGGC GTGCGATGAT CGCGAGAGCA CTCCTGCACA GACCGCGGCT GCTTATACTC
GACGAGCCCA CAGTCGGCCT GGATGTGCAG ACACGCCGGC GCGTCTGGGA TCTGATCCGC
AGGGTCAACT CAGATGGAGC CACGGTATTT CTGACGACCC ACTACATCGA GGAGGCGGAA
GCGCTCTGCA ACAGGGTCGG AATAATGCAT CATGGTAGGC TCATAGCCCT GGGGACTCCA
CTGGAGCTGC GCCGGATGAC GGGAATGGTG ACGGTTGAGG TCCAGAACAA CTCGAACGGT
ACAAGATATA GATACTTCCC TGACAGAGAT GCAGCCGCTG AGTATGTGAA AGCACTTCCT
GACAGCACCA AAGTTGTCAT GAGGGAATCG AATCTGGAGG ATGTCTTCGT GGAGCTGACT
GGCGAGAAGG TGCGTGAGAC TTGA
|
|---|
| Protein sequence | MCIIFPRKID GDQHCCLNSF ETNSMISITA LTKEYSGRCV VDDLNLHVAR GELFGFLGPN
GAGKTTTIRI ITTLTKPSSG RVLINGIDVV RHPSRVKAEF GVVQQHMSLN RDLTIEENLE
LHARLHHIPR SERRERISEL LEYVGLEEHA DYLIDDVSGG MKRRAMIARA LLHRPRLLIL
DEPTVGLDVQ TRRRVWDLIR RVNSDGATVF LTTHYIEEAE ALCNRVGIMH HGRLIALGTP
LELRRMTGMV TVEVQNNSNG TRYRYFPDRD AAAEYVKALP DSTKVVMRES NLEDVFVELT
GEKVRET
|
|---|
| |