Gene Mthe_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0521 
Symbol 
ID4463434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp536562 
End bp537281 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID639699526 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_842952 
Protein GI116753834 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCG TATGGCAGAT CTCTGCCATG CTCGTGAACG ATTCTCTTGT GCTTCCAAGC 
TTTCTTGATG TGGTGAACGC CTTCGGATCC AGCTGGAGGG ACATATTCTT TCAGGACCTG
CCTGTGAGCC TGCTGCACTT TTTCCTGGGG ATATTCGCAG GCATGATCAT AGCAATGCCT
CTTGGCATGG GGATGGGCTG GTCGAGGTCT CTGGATAAGA TCATCGATCC CATAGTGGAG
GTGGTCAGGC CGATACCACC CCTGGCCTGG ATACCATTCG CCATCGTCTG GTTCGGGCTC
ACACATGAGT CAGCAGGATT CATAGTCTTC ATCGGCGCCG TATTCCCGAT ACTGATAAAC
ACATATGTCG GGTTCAGGAA CCTGCCCCGG GTATATGTGG AATCGGCAAT GGTCCTGGGC
GCAACAAGGG ACAGGGATCT GATAAGGTAT GTGGCGCTTC CATATGCGCT CCCATCAATA
GCTGCGGGGA TAAGGATCGC GATGGGCATA GCCTGGATGT GTCTTGTTGC GGCTGAGATG
TTCGGAGTGA GCACGAGCGG TCTCGGATAC AGGATATGGT CTTACTACTA TCTCCACAAA
ATGGAGCACG TCCTGCTGTA CATGATCGTT CTGGGCATGC TCGGACTATT CATCGACAAG
GCGTTCAGGA GTATAATCGA GGACAGGCTT CTCAAATGGC GGGTCGGGCT CACACAGTGA
 
Protein sequence
MLAVWQISAM LVNDSLVLPS FLDVVNAFGS SWRDIFFQDL PVSLLHFFLG IFAGMIIAMP 
LGMGMGWSRS LDKIIDPIVE VVRPIPPLAW IPFAIVWFGL THESAGFIVF IGAVFPILIN
TYVGFRNLPR VYVESAMVLG ATRDRDLIRY VALPYALPSI AAGIRIAMGI AWMCLVAAEM
FGVSTSGLGY RIWSYYYLHK MEHVLLYMIV LGMLGLFIDK AFRSIIEDRL LKWRVGLTQ