| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0396 |
|---|
| Symbol | |
|---|
| ID | 4463198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 400816 |
|---|
| End bp | 402189 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699400 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_842829 |
|---|
| Protein GI | 116753711 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGA GCATAGATGC CAGGGGCGCT GCTAGGGCAG TGTTCTTCAC GGTTGTAATA
GTGGCAGTAT ACAGCGCCAT CTACATGATT CTCATGCGGT ATGAGGGCAG GTCCGAGCTT
GCCCATCCGA TGAACGCTGT GTACTGGGTT GTGATGACCA TTACGACCGT CGGCTACGGG
GACATAGTCT TCAGCAGCTC TCTGGGGCGC CTATTCAGCA TCGTGGTGAG CCTGAGCGGT
ATAGCTCTGG TCTTCGCTTT TGTCTTGCCT GGCATCGTGA CACCGTGGTT CGAGCATCTC
GGAAGAGAAC TTCCCGAAAG GGTGCCGGAG TGGATGAGCG GCCACATCCT GATCTGCGGC
TATGGCCCGA TGGTCGAGAG GCTGACAGAA AGGCTCGATG AGATGGGAAT TGAGTTTGCG
ATAGTCGAGA GCAGAGAATC TGTGGCAAGG AGCATCTTCA AAAGGTACAT TACCGTCTGG
GGAGACCCAT CGGATGTGCA GGTCTTGAGA AACGCAAACA TATCGACGGC CAGGATGGTC
ATGGTGAACT ATACAGATGA GGTAAACGCG GATGTGATTC TTACGATCAG GGAGGTCTCC
AGAGTCGAGA TAATCGCGAT GGTCGAGGAC CTGAGACACT CCAGGTTTCT GAGCTATGCC
GGAGCCTCCA GGGTTCTCTC GCCCAAGACG ATGCTGGGAA CGTTCGTCGC ACAGATATCA
AATCCATCCT GCGGGGAGTG CATTTTTCCA GGGGCGGTTC AGCTCTTTGG CACTTTGAGC
CTGGTGGAGG TACCTGTGCT TCCTGGCAGT CCTCTCTCTG AAAGAGAAAT CTCAGATCCT
CTCCTGATCC AGACAGGGGC TGCTATCGCC GGTCTATGGA AGAGGGGGGA GTTCATGCCC
AGACCGGCTG GGACCGAACG CATCTCCACC GGATCGGTCG TTCTTGCAGT GGGGGATTCG
GAGCAGCTCA TGCGCCTCAG GTCGCTGGGT GCTGGAGATG AGATGGAGAA GAGGTTTCTC
GTCGTGGGAT ACGGCGACGT TGGGCAGAGG CTTGTCCGAG TCTTGTGCGA GCACGGGGTA
GTGCCTGTAG TTGTGGACAG GCGGGATCTG GCCACGGATC GGTTCGAGCA CGTCAGGGGC
GACGGCTACT CAGAGGATGT CCTCGTCAGG GCTGGCGTGA AAGAGGCAAC ATGCATAATG
ATCATGCTGA ACAACGATCA TGACGCGATA TACGCGACAC TCGTCGCCAG GAACCTGAAC
CCGGACGCGT TCATAATAGC AAGAGCAAAC CATCTCAAAA CCACGGAGAA GCTCTACAGG
GCTGGAGCAG ACTATGTGGC ATCTGTGCCT ATGGTAGGAG CAAGATGCTC CTGA
|
|---|
| Protein sequence | MVESIDARGA ARAVFFTVVI VAVYSAIYMI LMRYEGRSEL AHPMNAVYWV VMTITTVGYG
DIVFSSSLGR LFSIVVSLSG IALVFAFVLP GIVTPWFEHL GRELPERVPE WMSGHILICG
YGPMVERLTE RLDEMGIEFA IVESRESVAR SIFKRYITVW GDPSDVQVLR NANISTARMV
MVNYTDEVNA DVILTIREVS RVEIIAMVED LRHSRFLSYA GASRVLSPKT MLGTFVAQIS
NPSCGECIFP GAVQLFGTLS LVEVPVLPGS PLSEREISDP LLIQTGAAIA GLWKRGEFMP
RPAGTERIST GSVVLAVGDS EQLMRLRSLG AGDEMEKRFL VVGYGDVGQR LVRVLCEHGV
VPVVVDRRDL ATDRFEHVRG DGYSEDVLVR AGVKEATCIM IMLNNDHDAI YATLVARNLN
PDAFIIARAN HLKTTEKLYR AGADYVASVP MVGARCS
|
|---|
| |