| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0352 |
|---|
| Symbol | |
|---|
| ID | 4462475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 349496 |
|---|
| End bp | 349969 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639699356 |
|---|
| Product | TspO and MBR like proteins |
|---|
| Protein accession | YP_842785 |
|---|
| Protein GI | 116753667 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.454759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAAA GATTCATCTT GATCGTTCTG TGCATAACGG TCTGTCAGCT TGCCGGTGTC
CTCGGGTCGT ACTTTACAGA TATGTCCGTC TCCACGTGGT ACCCGATGCT GATCAAACCA
TCGTACACCC CGCCAGGATG GCTCATAGGC GTTGTCTGGG TGGTGCTATA CACGCTCATG
GGAATATCGC TGTTCCTGGT GCTGGACTCG AAGCCAGAGT CAGGAACCCT GAAGAGTGCT
CTGATACCAT TCGGCGTTCA GCTTCTTCTC AACATCTCAT GGTCCGGAGC ATTTTTCGGA
TTGCGATCGC CACTGTACGC GCTGGTGGTC ATAGCTGCAC TCTGGCTCTC GATAATAATA
ACCATGAGGC GGTTTTACGA TGTCTCCAGA ATTGCGGGCG TTCTTCTTAT ACCCTACATC
ATGTGGGTGA GCTTTGCGGC ATACCTCAAT TACACGATCT GGAGGCTGAA CTGA
|
|---|
| Protein sequence | MRERFILIVL CITVCQLAGV LGSYFTDMSV STWYPMLIKP SYTPPGWLIG VVWVVLYTLM
GISLFLVLDS KPESGTLKSA LIPFGVQLLL NISWSGAFFG LRSPLYALVV IAALWLSIII
TMRRFYDVSR IAGVLLIPYI MWVSFAAYLN YTIWRLN
|
|---|
| |