Gene Mthe_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0154 
Symbol 
ID4462828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp146083 
End bp146631 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID639699163 
ProductXRE family transcriptional regulator 
Protein accessionYP_842594 
Protein GI116753476 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA AGCTTGAGGA GATCGGATCG CGGATACGTG AGCTTCGAGA GCTCTCAAAG 
ATTTCGCCTG AGGAGATGGC CGGATACCTC AAAGTGCCGC TTGAGACATA CTGCGGGTAC
GAGTCAGGCC ATCTCGACAT ACCTGCGAGC CTGCTTTTCA AGATCGCGCA GCGCCTCGAT
GTCGACATGA GTCTCCTTCT AACAGGCCAG GAGCCGAAGA TGAGCATCTT CACCGTGACC
AGAAAGGGGG AGGGAGTGGA GGTCGAGAGG AGGAAGCAGT ACAGGTACCA GAGCCTCGCG
GGGCGGTTCG CACATAAGAA GGCAGAGCCA TTCATAGTCA CCGTCGAGCC GCGGTCTGAA
AAGCCAGCGG TCTACAGCCA TCCCGGCCAG GAGTTCGACT ACATCCTGGA GGGGACCATA
AAGATATACA TCCACAACAA CGAGATCGTC CTCAACGAGG GCGATTCGAT ATTCTTCGAT
TCGTCTTATG ATCACGCTAT GGAGGCTCTC AACAACAGAC CTGCCAGGAT GCTTGTCATT
GTCATGTGA
 
Protein sequence
MNEKLEEIGS RIRELRELSK ISPEEMAGYL KVPLETYCGY ESGHLDIPAS LLFKIAQRLD 
VDMSLLLTGQ EPKMSIFTVT RKGEGVEVER RKQYRYQSLA GRFAHKKAEP FIVTVEPRSE
KPAVYSHPGQ EFDYILEGTI KIYIHNNEIV LNEGDSIFFD SSYDHAMEAL NNRPARMLVI
VM