| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3875 |
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| Symbol | |
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| ID | 7092571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 4248429 |
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| End bp | 4253129 |
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| Gene Length | 4701 bp |
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| Protein Length | 1566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643467160 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_002364119 |
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| Protein GI | 217979972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.146971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG ATCCGACGCA GCCAGCGGCT CCCCGCGAAC CCCTCTCCCG CGCCGTCCGC
GATCCCGGCC TGCCCAAGGC GCAGGGACTC TATTCGCCCG ACCGGGAGCA TGACGCCTGC
GGCGTCGGCT TCGTCGCCAA TATGCATAAC AAGAAGTCGC ATGAGATCGT CGAGATGGGT
CTTCAGATCC TGCTCAATAT CGATCATCGC GGCGCCGTCG GAGCCGATCC CAAGGCGGGC
GACGGCTGCG GCATGCTGGT TCAGATCCCG CATGATTTCT TCGCCGCCAA GGCGCGCGAG
CTCGGTTTCG AACTGCCGGA GCCGGGCGAA TACGCCGTCG GCGCGCTGTT CCTGCCGCGC
GATCCCGAGG GCCGCAAAAT CGTCGAGGAC ATCGTCGAGA AGGTCGTCGC CGACGAGGGC
CAGATTTTTC TCGGCTGGCG CGACACGCCG GTCGATCCGT CGAACCTTGG CGAGACGGTG
AAGCCGACCG AACCGTTCAG CCGCCAGATC TTTATCAAGC GCGGCGCCAA CGCCGCCGAT
CAGACCGAGT TCGAGCGGCG GCTGTTCCTT TTGCGCAAGG TCATTTCGAA CACCGTGCAT
GACCTCGGCG ACCCTCGCGT CGAAGGTTTT TATCCGGTTT CGCTCTCCTC CCGGACGGTG
GTGTACAAAG CGCTGCTGCT CGCCGGCGCG CTCGGCCCTT ATTACAAGGA CCTGACCGAC
CCGAATTTCG TGTCGGCGCT CGCCCTTGTG CATCAGCGCT TCTCGACCAA CACCTTCCCG
ACCTGGTCGC TGACCCACCC GTTCCGCATG GTCGCCCATA ATGGCGAGAT CAACACGCTG
CGCGGCAACG TCAACTGGAT GGCGGCGCGG CAGGCCTCGG TCGCCTCGGA TCTGTTCGGC
GCCGATATTT CGAAGCTCTG GCCGATCTCC TATGAGGGCC AGTCGGACAC CGCCTGTTTC
GACAATGCGC TCGAATTTCT GGTGCAGGGC GGCTATTCGC TCGCCCATGC GATGATGATG
CTCATTCCGG AGGCCTGGAC CGGCAATCCG CTGATGAATG AGGCGCGGCG CACCTTCTAT
GAATATCACG CCGCCATGAT GGAGCCGTGG GACGGGCCGG CGGCCATGGC CTTTACCGAC
GGCCGCCAGA TCGGCGCGAC GCTCGATCGC AACGGCCTGC GTCCGGCGCG CTATATCGTC
ACCGACGACG GCCTTGTCGT GCTCGCTTCC GAGGTCGGCG TGCTGCCGAT TCCGGACGAG
CGCATCATCG CCAAATGGCG CCTGCAGCCC GGCAAGATGC TGCTGGTCGA TCTCGAACAG
GGCCGCATCG TCTCCGACGA CGAGATGAAG ACCGCGCTCG CCACCTCGCA CCCCTATGCG
GAGTGGCTGA AGAACACGCA GATCTTCCTT GAGGACCTGC CGCATGTCGA GCCGCGCTCG
ACCCGCACCG ACGTGTCGCT GCTCGACCGG CAGCAGGCGT TCGGCTACAC GCAGGAAGAT
CTCGCGATCC TGATGGAGCC GATGGCCGTG ACCGGCCAGG AAGCGATCGG GTCGATGGGA
ACCGACACGC CGATCTCGGC GCTGTCCTCG GCCTCGAAGC CGCTCTACAC CTATTTCAAG
CAGAATTTCG CGCAGGTGAC CAACCCGCCA ATCGACCCGA TCCGCGAAGA GCTGGTCATG
AGCCTCGTGT CCTTCATCGG TCCGCGGCCG AATATCCTCG ACCACGACGG CAGCTCCAAG
CTGAAGCGGC TCGAGGTTCG GCAGCCGATC CTGACCAACA GCGATCTCGA AAAGATCCGC
TCGATCGGCC ATTTCGAGGA AGCCTTCGAC ACCAAGACGC TCGACATCAC CTATAAGGCG
GACGCCGGCG CCGAGGGCAT GGGCGAGGCG ATCGCGCGCC TGTGCGACCG CGCCGACCAG
GCGGTGAAGG GCGGCTTCAA CATCATCATC CTTTCGGACC GCCTCGCCGG CCCGGACCGC
ATCCCGATTC CGGCGCTGCT CGCCACCGCC GCCGTGCATC ATCATCTGAT CCGCAAGGGG
CTGCGCACCT CGGTCGGCCT CGTCGTCGAG ACGGGCGAGG CGCGCGAGGT GCATCATTTC
GCGCTGCTCG CCGGCTATGG GGCCGAAGCG ATCAACCCCT ATCTCGCCTT CGAATCCCTG
GCCGCGATGG CCGACGAGTT CCCCGAAGAA GTCGACGGCT ATGAGGCGTG CAAGCGCTTC
ATCAAATCGG TCGACAAGGG CCTCCTCAAG GTCATGTCGA AGATGGGCAT TTCGACCTAT
CAATCCTATT GCGGCGCGCA GATTTTCGAC GCCGTCGGCC TCGCCGACGA TTTCGTCGCC
AAATATTTCA CCGGGACCGC AACTCACATC GGCGGCGTCG GGCTCAAAGA GATCGCGCAG
GAAACCGAGC GCCGCCACAG GGACGCCTTC GGCGATTCGC CGGTCTACCG CAACGCGCTC
GGCGTCGGCG GCGATTACGC CTTTCGCATC CGCGGCGAGG CGCATTCCTG GACGCCGCAA
TCGGTGACCC TGTTGCAGCA CGCCGTGCGC GGCAACAATT CGGACGCCTA CAAGGCCTAT
GCCGCGCTGC TCAACGAGGA AACCGCCAAT CCGCTGACGA TCCGGTCGCT GTTCCGCATC
AAGACGGCCG AAGAGGACGG CCGCGCGCCG GTTCCGATCG AGGAAGTTGA ATCGGCGGCG
ACGATCGTCC GGCGCTTCTC GACCGGCGCC ATGTCCTATG GCTCGATTTC GCGCGAGGCG
CATACGACGC TGGCGATCGC CATGAACCGG ATCGGCGGCA AGTCGAACAC AGGCGAAGGC
GGCGAGGAAT CGGATCGCTA CAAGCCGCTC CCGAACGGCG ATTCGATGCG CTCGGCGATC
AAGCAGGTCG CCTCGGGACG GTTCGGCGTC ACCGCCGAAT ATCTCATGAA CGCCGATATG
ATCCAGATCA AGATGGCGCA GGGCGCGAAG CCCGGCGAGG GCGGCCAGCT GCCGGGCCAC
AAGGTCGACG CGGTGATCGC CAAGGTGCGT CATTCGACGC AAGGCGTCGG TCTGATTTCG
CCGCCGCCGC ACCATGACAT CTATTCGATC GAGGATCTGG CGCAGCTCAT CACCGATCTG
AAGAACGTCA ATCCGGCGGC GATGATCTCC GTAAAACTCG TCTCCGAGAT CGGCGTCGGC
ACGGTGGCGG CGGGCGTCTC CAAGGCGCGC GCGGATCACG TCACCATTTC GGGCTATGAG
GGTGGCACCG GCGCTTCGCC GCTGACCTCC ATCAAACATG CCGGCAGCCC ATGGGAAATC
GGGCTCGCCG AGACGCAACA GACGCTTGTC CTCAATCGCC TGCGCACGCG CATCGCCGTG
CAGGTCGACG GCGGGTTGCG CACCGGGCGC GACGTCATCG TCGGGGCGCT GCTCGGCGCC
GACGAATTCG GCTTCGCCAC CGCGCCGCTC ATCGCGGCGG GCTGCATCAT GATGCGCAAA
TGCCATCTGA ACACCTGCCC CGTCGGCGTC GCGACGCAGG ATCCGGTGCT GCGCAAGCGC
TTCGTCGGCC TGCCGGAACA TGTCATCAAC TTCTTCTTCT TCATCGCGGA GGAAGTGCGC
GGTCTGATGG CGCAGATGGG CTATCGCACT GTCGACGAAA TGGTCGGGCA GATGCAGATG
CTCGACAAGC AAAAGGCGAT CACACATTGG AAGGCGCAAG GGCTCGACTT CACCAAACTG
TTCCATAAGC CCGAGCCGGG GCCCGGCGAG ACGATCCACC GCTCGACAAC GCAGAACCAC
GGGCTCGACA AGGTGCTCGA CCGCAAGCTG ATTGCGCAGG CGACGCCCGC GCTCGAAGAG
CGGACCAAGG TGACGATCGA AACGCCGATC CACAACACCG ATCGCGCGAC CGGGAGCATG
TTGTCCGGCG AGATCGCCAA ACGCTACGGG CATGCCGGCC TGCCGGCGGA TACGATCAGC
ATTTTCGCCA AGGGCACCGC CGGGCAGAGT TTTGGCGCCT GGCTCGCGGC CGGCGTCAGG
CTGCAGCTCG ACGGGCAGGC CAATGACTAT GTCGGCAAGG GCCTGTCCGG CGGCAAGATC
ATCATCCGGC CTCCGGCCAC ATCGCGCGTC CTCGCGGATG AGGCGATCAT CGTCGGCAAC
ACTGCGCTCT ATGGCGCCAT CGCCGGCGAG TGTTATTTCT CCGGCGTCGC CGGAGAGCGT
TTCGCGGTGC GCAATTCCGG CGCGGTCGCG GTGGTCGAGG GCGTCGGCGA TCACGGCTGC
GAATATATGA CGGGCGGCGT TGTCGTCGTC ATCGGCTCGA CGGGGCGCAA CTTTGCCGCC
GGCATGTCCG GCGGCATCGC CTATGTGCTC GATGAAGCGG GAAATTTCGC GCAGCGCTGC
AACATGGCGA TGGTAGAGTT GCAGCCGCTC GAGGAAGAAG AACAGGCGAT GCAGGACAGC
TATCATCAGG GCGGCGATCT CGACTCGCAT GGGCTCGTCG ATGTGATGGG CGACATGACG
CGCTTCGACG CCGAGCGCCT GCATCAGCTG ATCTCAAATC ATGCCGAATA CACAGGCTCG
GCGCGAGCGA AGCTGATCCT TGGGAATTGG GACGAATACC GGCACAAATT CCGCAAGGTG
ATGCCGGTCG AATATCGCCG CGCCATCGAG GAGATGAAGC TGGATCAGGG CCGCACATTG
ATGGCGGCAG TCGGAATGTA G
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| Protein sequence | MMTDPTQPAA PREPLSRAVR DPGLPKAQGL YSPDREHDAC GVGFVANMHN KKSHEIVEMG
LQILLNIDHR GAVGADPKAG DGCGMLVQIP HDFFAAKARE LGFELPEPGE YAVGALFLPR
DPEGRKIVED IVEKVVADEG QIFLGWRDTP VDPSNLGETV KPTEPFSRQI FIKRGANAAD
QTEFERRLFL LRKVISNTVH DLGDPRVEGF YPVSLSSRTV VYKALLLAGA LGPYYKDLTD
PNFVSALALV HQRFSTNTFP TWSLTHPFRM VAHNGEINTL RGNVNWMAAR QASVASDLFG
ADISKLWPIS YEGQSDTACF DNALEFLVQG GYSLAHAMMM LIPEAWTGNP LMNEARRTFY
EYHAAMMEPW DGPAAMAFTD GRQIGATLDR NGLRPARYIV TDDGLVVLAS EVGVLPIPDE
RIIAKWRLQP GKMLLVDLEQ GRIVSDDEMK TALATSHPYA EWLKNTQIFL EDLPHVEPRS
TRTDVSLLDR QQAFGYTQED LAILMEPMAV TGQEAIGSMG TDTPISALSS ASKPLYTYFK
QNFAQVTNPP IDPIREELVM SLVSFIGPRP NILDHDGSSK LKRLEVRQPI LTNSDLEKIR
SIGHFEEAFD TKTLDITYKA DAGAEGMGEA IARLCDRADQ AVKGGFNIII LSDRLAGPDR
IPIPALLATA AVHHHLIRKG LRTSVGLVVE TGEAREVHHF ALLAGYGAEA INPYLAFESL
AAMADEFPEE VDGYEACKRF IKSVDKGLLK VMSKMGISTY QSYCGAQIFD AVGLADDFVA
KYFTGTATHI GGVGLKEIAQ ETERRHRDAF GDSPVYRNAL GVGGDYAFRI RGEAHSWTPQ
SVTLLQHAVR GNNSDAYKAY AALLNEETAN PLTIRSLFRI KTAEEDGRAP VPIEEVESAA
TIVRRFSTGA MSYGSISREA HTTLAIAMNR IGGKSNTGEG GEESDRYKPL PNGDSMRSAI
KQVASGRFGV TAEYLMNADM IQIKMAQGAK PGEGGQLPGH KVDAVIAKVR HSTQGVGLIS
PPPHHDIYSI EDLAQLITDL KNVNPAAMIS VKLVSEIGVG TVAAGVSKAR ADHVTISGYE
GGTGASPLTS IKHAGSPWEI GLAETQQTLV LNRLRTRIAV QVDGGLRTGR DVIVGALLGA
DEFGFATAPL IAAGCIMMRK CHLNTCPVGV ATQDPVLRKR FVGLPEHVIN FFFFIAEEVR
GLMAQMGYRT VDEMVGQMQM LDKQKAITHW KAQGLDFTKL FHKPEPGPGE TIHRSTTQNH
GLDKVLDRKL IAQATPALEE RTKVTIETPI HNTDRATGSM LSGEIAKRYG HAGLPADTIS
IFAKGTAGQS FGAWLAAGVR LQLDGQANDY VGKGLSGGKI IIRPPATSRV LADEAIIVGN
TALYGAIAGE CYFSGVAGER FAVRNSGAVA VVEGVGDHGC EYMTGGVVVV IGSTGRNFAA
GMSGGIAYVL DEAGNFAQRC NMAMVELQPL EEEEQAMQDS YHQGGDLDSH GLVDVMGDMT
RFDAERLHQL ISNHAEYTGS ARAKLILGNW DEYRHKFRKV MPVEYRRAIE EMKLDQGRTL
MAAVGM
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