| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3858 |
|---|
| Symbol | |
|---|
| ID | 7092554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4226139 |
|---|
| End bp | 4227497 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643467143 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxylase |
|---|
| Protein accession | YP_002364102 |
|---|
| Protein GI | 217979955 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0717744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAA AAATCCTCAT CGCCAATCGC GGCGAGATCG CGTTGCGGAT TCTGCGCGCG
GCCAAGGAGC TTGGCATTGC GACGGTCGCG GTCCATTCGA CCGCCGATTC CGAAGCAATG
CATGTCAAGC TCGCCGACGA ATCCGTCTGC GTCGGGCCGC CGCCCGCTCG CGAATCCTAT
CTCAACATTC CGGCTCTCCT CGCCGCCTGC GAGATCACCG GGGCCGAGGC GCTGCATCCC
GGCTATGGAT TTTTGTCGGA AAACGCCCGC TTCGCGGAAA TCCTCGCCGA GCATCACATC
GTATTCGTCG GGCCAAAGCC GGAGCATATC CGCCTGATGG GCGACAAGAT CGAGGCGAAG
CGCACGGCGC TGCGGCTCGG CATCCCATGT GTGCCAGGCT CGGCCGGCGC CATCACGGAT
GAGGCCGAGG CGAAGGCGGC GGCAAGAGAA CTCGGCTATC CTGTACTCGT CAAGGCGGCG
GCGGGCGGCG GCGGCCGCGG CATGAAGGTT TCATTCAGCG AGGAGGACAT CGCCTCGACG
CTGGAGACGG CGCGCATGGA GGCGAAGTCC GCCTTTGGCG ATGATTCCGT GTACCTTGAA
AAATATCTCG AAAAACCCCG CCACATCGAA GTGCAGATTC TCGGCGACGG ACGCGGCGGC
GCGATCCATC TTGGCGAGCG CGACTGCTCG CTGCAGCGCC GGCACCAGAA AGTCTGGGAG
GAAGGCCCGT CCCCCGCGCT CAATGAGTCG CAGCGCAAGG AAATCGGCGA GATCTGCGCG
GCGGCCATGC GCGAACTGCA GTATGCCGGC GCCGGCACGA TCGAATTCCT CTATGAGGAC
GGCAAATTCT ATTTCATCGA GATGAACACC CGCATCCAGG TCGAGCATCC GGTGACCGAG
ATGATCACCG GCGTCGATCT CGTCAATGAG CAGATCAAGA TCGCCGCCGG ATCGGCGCTG
ACCTTGACGC AGGAAGACGT TTCCTTCAAC GGACACGCCA TCGAATGCCG CATCAACGCC
GAACATCCGG CCACCTTCCG CCCCTCGCCG GGGATGATCA ATTATTACCA TCCGCCGGGC
GGCCTCGGCG TCCGCGTCGA TAGCGCCGTC TACGCCGGCT ATACGATCCC GCCGACCTAT
GATTCACTTG TCGGCAAGCT GATCGTGCAT GGCCGCAATC GCAATGAAGC GCTGATGCGC
CTGCGCCGCT CGCTCGATGA GTTCATTATC GACGGCATCG ACACGACCAT CCCGCTGTTC
CAGACGCTGG TGCGCAACGC CGACATCCAG AACGGGCTTT ACGATATCCA TTGGCTCGAA
AAATTTCTGG CCGACGGCGG CATGGACGGC ACGGAGTAA
|
|---|
| Protein sequence | MFEKILIANR GEIALRILRA AKELGIATVA VHSTADSEAM HVKLADESVC VGPPPARESY
LNIPALLAAC EITGAEALHP GYGFLSENAR FAEILAEHHI VFVGPKPEHI RLMGDKIEAK
RTALRLGIPC VPGSAGAITD EAEAKAAARE LGYPVLVKAA AGGGGRGMKV SFSEEDIAST
LETARMEAKS AFGDDSVYLE KYLEKPRHIE VQILGDGRGG AIHLGERDCS LQRRHQKVWE
EGPSPALNES QRKEIGEICA AAMRELQYAG AGTIEFLYED GKFYFIEMNT RIQVEHPVTE
MITGVDLVNE QIKIAAGSAL TLTQEDVSFN GHAIECRINA EHPATFRPSP GMINYYHPPG
GLGVRVDSAV YAGYTIPPTY DSLVGKLIVH GRNRNEALMR LRRSLDEFII DGIDTTIPLF
QTLVRNADIQ NGLYDIHWLE KFLADGGMDG TE
|
|---|
| |