Gene Msil_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3800 
Symbol 
ID7090728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp4163921 
End bp4165174 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content59% 
IMG OID643467085 
ProductCytochrome b/b6 domain protein 
Protein accessionYP_002364044 
Protein GI217979897 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.306373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAG AATCGACTTA CGTCCCGAAG AATGCAGTCG CGAAATGGTT TGAAAGCCGC 
TTGCCGGTGC TGGGGCTGGC GCATTCCTCC TTCGTGGTCT TCCCCAATCC GCGCAATCTG
AATTACTGGT GGACCTTCGG CGGCATTCTC GCCTTTCTGC TCATTTCGCA GATCATCACC
GGCGTCGTGC TGGCGATGCA TTACACGCCC GAATCCACGC TCGCCTTCGA TTCGGTCGAG
CGCATCATGC GCGACGTGAA CTTCGGCTGG CTGATGCGCT ACTGGCACGC CAATGGCGCG
TCGATGTTCT TCATCGGCCT CTATGTCCAC ATTCTTCGCG GCATGTATTA CGGCTCCTAC
AAGGCGCCGC GCGAAGTTTT ATGGCTGCTC GGATTCATCA TCTATCTCCT GTCGATGGCG
ACGGCCTTCA TGGGTTATGT GCTGCCTTGG GGACAGATGA GCTTTTGGGG CGCGACCGTC
ATCACCAGCC TGTTCTCGGC GATCCCGGTC GTTGGCGACG CCATCACCAC TTGGCTGTGG
GGCGGCTATT CGGTCGATAA TGCGACGCTG AACCGCTTCT TCGCCCTGCA TTATCTGCTG
CCCTTCATGA TCGTCGGCGT CGTCGGCCTG CATATCTGGG CGCTGCATGT GCCGGGATCG
AACAATCCGA CCGGCATCGA GCCGGAGAGC GCGAAAGACA CCCTTCCCTT CCACCCCTAT
TTCACGGTGA AGGACGGGTT TGCGCTGACC GTTTTCCTGA TCTTCTACGC CTGGTTCGTG
TTCTACATTC CGAACTATCT CGGCCACGCC GACAATTACA TCGAGGCCAA CCCGCTGGTG
ACGCCGCCCC ATATCGTTCC GGAATGGTAC TATCTGCCCT TCTACGCGAT CCTCCGCTCG
ATCCCCTCGA AATTTGGCGG CTTCCTCGCC ATGTTCGGCG CCGTGCTGAT TGTCGCCGTT
TTGCCCTGGC TCGACACTTC GAAGATCAAA TCGGCGGTCT ACCGTCCATT GTTTCGGATC
TTCTTCTGGA TCTTCGTCGT CGACGCCGTG CTGCTCGGCT ATATCGGCTC GCAACCGCCG
GAGGGCGGCG CGGTGATCGC CGGACGCCTG TTGACGGCCT ATTATTTCAT CCACTTCCTG
GTGATCCTGC CGCTGCTCAG CCGATTTGAG CCGACGCGGC CGCTGCCGGC CTCCATTTCC
GACGCGGTGC TTGGCGACTC CGTGAAGGCG GAGCCTGCGC TGGCGAGCCA CTGA
 
Protein sequence
MSGESTYVPK NAVAKWFESR LPVLGLAHSS FVVFPNPRNL NYWWTFGGIL AFLLISQIIT 
GVVLAMHYTP ESTLAFDSVE RIMRDVNFGW LMRYWHANGA SMFFIGLYVH ILRGMYYGSY
KAPREVLWLL GFIIYLLSMA TAFMGYVLPW GQMSFWGATV ITSLFSAIPV VGDAITTWLW
GGYSVDNATL NRFFALHYLL PFMIVGVVGL HIWALHVPGS NNPTGIEPES AKDTLPFHPY
FTVKDGFALT VFLIFYAWFV FYIPNYLGHA DNYIEANPLV TPPHIVPEWY YLPFYAILRS
IPSKFGGFLA MFGAVLIVAV LPWLDTSKIK SAVYRPLFRI FFWIFVVDAV LLGYIGSQPP
EGGAVIAGRL LTAYYFIHFL VILPLLSRFE PTRPLPASIS DAVLGDSVKA EPALASH